Table 1. Samples from CF and non-CF volunteers.
| Study | Patient | Time-point | Disease severity | Clinical state | Antibiotic therapy | Metagenome data | Breath gas data | Healthy control |
|---|---|---|---|---|---|---|---|---|
| Longitudinal | CF1 | A | Mild/moderate | Stable | Suppressive | No | Yes | H5 |
| Longitudinal | CF1 | B | Stable | Suppressive | No | Yes | H5 | |
| Longitudinal | CF1 | C | Treatment | Acute | No | Yes | H5 | |
| Longitudinal | CF1 | D | Stable | Suppressive | No | Yes | H5 | |
| Longitudinal | CF1 | E | Stable | Suppressive | No | Yes | H5 | |
| Longitudinal | CF1 | F | Stable | Suppressive | No | Yes | H5 | |
| Longitudinal | CF1 | G | Stable | Suppressive | No | Yes | H5 | |
| Cross-sectional | CF1 | H | Stable | Suppressive | Yes | Yes | H3 | |
| Cross-sectional | CF2 | A | Moderate | Stable | Suppressive | Yes | Yes | H2 |
| Cross-sectional | CF3 | A | Moderate | Stable | Suppressive | Yes | Yes | H1 |
| Cross-sectional | CF4 | A | Mild | Stable | Suppressive | Yes | Yes | H2 |
| Cross-sectional | CF5 | A | Severe | Stable | Acute | Yes | Yes | H2 |
| Cross-sectional | CF6 | A | Moderate | Treatment | Acute | Yes | Yes | H4 |
| Cross-sectional | CF7 | A | Severe | Post treatment | Acute | Yes | Yes | H2 |
| Cross-sectional | H1 | A | None | None | None | No | Yes | |
| Cross-sectional | H2 | A | None | None | None | Yes | Yes | |
| Cross-sectional | H3 | A | None | None | None | No | Yes | |
| Cross-sectional | H4 | A | None | None | None | No | Yes | |
| Longitudinal | H5 | A | None | None | None | No | Yes |
Abbreviation: CF, cystic fibrosis.