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. Author manuscript; available in PMC: 2014 Jul 5.

Published in final edited form as: Cancer Genet. 2013 Jul 5;206(5):191–205. doi: 10.1016/j.cancergen.2013.04.006

Table 3. Smallest recurrent homozygously deleted regions, codeleted in the same MMt cell lines, and their main target genes.

Cytoband and gene

	9p21.3	9p21.2	16p13.3	22q11.23	22q12.2	3q26	8p11.22	3p21.2	4q22.1	13q12.11

Cell line	CDKN2A	LINGO2	RBFOX1/A2BP1	GSTT1^a	NF2	No known genes^a	ADAM5P and ADAM3A^a	RPL29 and DUSP7	CCSER1/FAM190A	LATS2
H2052	X	X	X		X	X				X
H2722	X	X		X				X
H2595	X	X						X
H2596	X	X				X
H2795	X	X
H28	X	X				X
H290	X	X
H2691	X		X	X			X		X
H2869	X		X	X
H2591	X		X		X	X	X
H2369	X		X		X
H2461	X		X		X				X
H2373	X		X				X			X
H2810	X			X
H513	X			X
H2731	X
H2818	X
No. of cell lines	17	7	7	5	4	4	3	2	2	2

^a

Area completely included in a copy number variation region.