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. 2014 May 22;9(5):e98022. doi: 10.1371/journal.pone.0098022

Table 1. Characteristics of eligible studies included in the meta-analysis.

Name Year Country Ethnicity Cancer type Sample size Source Controls in HWE Genotyping method
cases/controls
Hosono [33] 2013 Japan Asian Endometrial 91 261 HB Yes TaqMan
Li [18] 2013 China Asian Colorectal 451 626 Mixed Yes PCR-RFLP
Roszak [17] 2013 Poland Caucasian Cervical 446 491 PB Yes PCR-HRM
Xue [34] 2013 China Asian Lung 410 410 HB Yes PCR-RFLP
Nakao [24] 2012 Japan Asian Pancreas 185 1465 HB No TaqMan
Pan [25] 2012 China Asian Gastric 176 308 Mixed No MassARRAY
Santonocito [19] 2012 Italy Caucasian Melanoma 167 99 NM Yes PCR-HRM
Santos [35] 2012 Potugal Caucasian Thyroid 108 216 HB Yes TaqMan
Wen [32] 2012 China Asian Gastric 307 307 Mixed Yes MassARRAY
Ye [36] 2012 China Asian Cervical 539 800 HB Yes MA-PCR
Yuan [37] 2012 China Asian Head and neck 395 883 PB Yes TaqMan
Zhang [38] 2012 China Asian Cervical 80 176 HB Yes SNPware 12plex assay
Yosunkaya [39] 2010 Turkey Caucasian Glioma 119 180 PB Yes PCR-RFLP
Gao [40] 2010 US Caucasian Prostate 453 119 HB Yes Sequence
Jin [41] 2010 Korea Asian NHL 573 721 PB Yes PCR-HRM
Rajaraman [42] 2010 US Caucasian Glioma 340 463 HB Yes TaqMan
Rajaraman 2010 US Caucasian Meningioma 121 463 HB Yes TaqMan
Rajaraman 2010 US Caucasian Acoustic neuroma 65 463 HB Yes TaqMan
Wang [43] 2010 China Asian Bladder 234 253 HB Yes PCR-RFLP
Liu [44] 2009 US Caucasian Glioma 372 365 PB Yes MassARRAY
McKean [45] 2009 US Caucasian Glioblastoma 987 1935 Mixed Yes MassARRAY
Zhang [46] 2009 China Asian Gastric 236 320 HB Yes PCR-RFLP
Chiang[47] 2008 China Asian Thyroid 283 469 HB Yes TaqMan
Smith[14] 2008 US Caucasian Breast 314 397 HB Yes MassARRAY
Berndt[48] 2007 US Caucasian Colorectal 649 659 NM Yes TaqMan
Cao[49] 2007 France Caucasian Breast 83 100 HB Yes Sequence
Figueroa[50] 2007 Spain Caucasian Bladder 1138 1131 HB Yes TaqMan
Li[51] 2007 US Caucasian Head and neck 830 854 HB Yes PCR-RFLP
Stern[52] 2007 Singapore Asian Colorectal 307 1173 PB Yes TaqMan
Landi[53] 2006 Multiple regions Caucasian Lung 292 307 HB Yes APEX
Li[54] 2006 US Caucasian Melanoma 602 603 HB Yes PCR-RFLP
Miao[15] 2006 China Asian Gastric 500 1000 PB No PCR-RFLP
Shen[55] 2006 US Caucasian NHL 455 535 PB Yes TaqMan
Wu[56] 2006 US Caucasian Bladder 606 595 HB Yes TaqMan
Zhai[57] 2006 China Asian Breast 302 639 HB Yes PCR-RFLP
Zhang[58] 2006 US Caucasian Breast 1715 1371 PB Yes TaqMan
Zhang[16] 2005 China Asian Lung 1000 1000 HB Yes PCR-RFLP
Hao[59] 2004 China Asian Esophageal 414 479 HB Yes PCR-RFLP
Lockett[5] 2004 US Caucasian Prostate 438 427 HB Yes MassARRAY

PB: population-based; HB: hospital-based; HWE: Hardy-Winberg equilibrium. Genotyping method: PCR-RFLP, polymerase chain reaction-restriction fragment length polymorphism; MassARRAY: genotyping was performed using the Sequenom MassARRAY iPLEXTM platform2. MassARRAY Workstation version 3.3 software was used to process and analyze iPLEX SpectroCHIP bioarrays; PCR-HRM, PCR cycling and high resolution melting analysis was performed on the Rotor-Gene 6000TM. APEX: polymorphism was analyzed together for a given sample by a microarray technique based on the arrayed primer extension principle.