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. 2014 Mar 7;3:67. [Version 1] doi: 10.12688/f1000research.3605.1

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Copyright: © 2014 Stafford KA and Palmer III AG

This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Data associated with the article are available under the terms of the Creative Commons Zero "No rights reserved" data waiver (CC0 1.0 Public domain dedication).

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Figure 8. — Calculated S ² values are shown for the four active-site residues in RNase H homologs. Left: soRNH (dark blue), ecRNH (light blue), ctRNH (magenta), ttRNH (red), hsRNH (purple). Right: ecRNH (light blue), XMRV WT (green), XMRV ∆C (yellow), HIV (brown). All simulations were carried out at 300K in the AMBER99SB force field with TIP3P water with structures protonated to reflect a pH of 5.5.