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. 2014 Mar 7;31(6):1333–1342. doi: 10.1093/molbev/msu098

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Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution 2014. This work is written by US Government employees and is in the public domain in the US.

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Fig. 4. — Genes classified into different categories of cis- or trans-acting expression differences. Each plot shows the log 2 normalized cis- (x-axis) or trans- (y-axis) effect for the T₀ (A), M1 (B), M1/M2 (C), and M2 (D) stages. Each circle shows one of 677 genes that could be classified into four categories of expression divergence, which are: cis-only (red), trans-only (green), cis+trans (blue), and cis-trans (orange). Genes without significant expression differences are shown in gray. Inset within each panel shows the number of genes classified into each category.