Table 1.
Eighteen Genes with Tajima’s D Scores of > 1 in Both the Guinean and Gambian Populations.
| Gene ID | Old Gene ID | Number of SNPs (Guinea) | Tajima’s D (Guinea) | Number of SNPs (Gambia) | Tajima’s D (Gambia) | Product Description |
|---|---|---|---|---|---|---|
| PF3D7_0104100 | PFA0205w | 65 | 1.16 | 62 | 1.05 | Conserved plasmodium membrane protein |
| PF3D7_0113800 | PFA0665w | 230 | 1.36 | 213 | 1.15 | DBL-containing protein |
| PF3D7_0114500 | PFA0700c | 14 | 1.04 | 14 | 1.27 | Plasmodium-exported protein (hyp10) |
| PF3D7_0201600 | PFB0080c | 25 | 2.46 | 22 | 2.07 | Plasmodium-exported protein (PHISTb) |
| PF3D7_0221000 | PFB0950w | 21 | 2.03 | 20 | 1.80 | Plasmodium-exported protein |
| PF3D7_0321200 | PFC0935c | 17 | 1.65 | 15 | 1.68 | N-acetylglucosamine-1-phosphate transferase, putative |
| PF3D7_0420200 | PFD0980w | 16 | 1.30 | 13 | 2.02 | Holo-(acyl-carrier protein) synthase |
| PF3D7_0508800 | PFE0435c | 5 | 1.10 | 4 | 1.07 | Single-stranded DNA-binding protein (SSB) |
| PF3D7_0601500 | PFF0075c | 6 | 1.05 | 5 | 1.64 | Plasmodium-exported protein (PHISTb) |
| PF3D7_0710200 | PF07_0042 | 131 | 1.32 | 118 | 1.41 | Conserved plasmodium protein |
| PF3D7_0710400 | MAL7P1.32 | 9 | 1.25 | 8 | 1.07 | Nucleotide excision repair protein |
| PF3D7_0720400 | PF07_0085 | 11 | 1.06 | 12 | 1.29 | Ferrodoxin reductase-like protein |
| PF3D7_1004800 | PF10_0051 | 18 | 2.34 | 18 | 2.20 | ADP/ATP carrier protein |
| PF3D7_1035700 | PF10_0348 | 26 | 1.33 | 21 | 2.48 | Duffy binding-like merozoite surface protein (MSPDBL1) |
| PF3D7_1036300 | PF10_0355 | 84 | 2.68 | 85 | 2.50 | Merozoite surface protein (MSPDBL2) |
| PF3D7_1133400 | PF11_0344 | 70 | 1.45 | 63 | 1.70 | Apical membrane antigen 1 (AMA1) |
| PF3D7_1253100 | PFL2555w | 11 | 2.11 | 9 | 2.82 | Plasmodium-exported protein (PHISTa) |
| PF3D7_1301800 | PF13_0074, 0075 | 146 | 1.20 | 128 | 1.42 | Surface-associated interspersed protein 13.1 (SURFIN 13.1) |
Note.—Tajima’s D scores were calculated for all genes with three or more SNPs following masking or repeat regions and exclusion of SNPs within introns.