Table 6. Genome-wise and suggestive significant SNPs for sum of fatty acid traits.
Trait | Rankb | SNP | Chr. | Position(bp) | Nearest Gene/Candidate Gene | Distance(bp) | Raw P_valuea | P_value Bonferroni |
SFA | 13 | Hapmap42233-BTA-49670 | 1 | 82559884 | C1H3orf70/ EHHADH | 14106/38733 | 6.58E-06 | 0.267 |
SFA/UFA | 14 | Hapmap42233-BTA-49670 | 1 | 82559884 | C1H3orf70/ EHHADH | 14106/38733 | 4.96E-06 | 0.202 |
UFA | 33 | ARS-BFGL-NGS-13938 | 2 | 111650859 | MOGAT1 / ACSL3 | 19295/146311 | 2.25E-05 | 0.912 |
SFA | 8 | Hapmap42304-BTA-73062 | 5 | 5049476 | KRR1/ OSBPL8 | 14567/770655 | 5.51E-06 | 0.224 |
SFA/UFA | 12 | Hapmap42304-BTA-73062 | 5 | 5049476 | KRR1/ OSBPL8 | 14567/770655 | 4.17E-06 | 0.169 |
UFA | 28 | Hapmap42304-BTA-73062 | 5 | 5049476 | KRR1/ OSBPL8 | 14567/770655 | 2.02E-05 | 0.819 |
SFA/UFA | 32 | ARS-BFGL-NGS-38038 | 5 | 27992179 | NR4A1 | Within | 1.80E-05 | 0.731 |
UFA | 26 | ARS-USMARC-624 | 5 | 28859701 | CSRNP2 | Within | 1.87E-05 | 0.760 |
SFA | 10 | ARS-BFGL-NGS-8796 | 5 | 29095603 | LOC510716 | Within | 6.04E-06 | 0.245 |
SFA/UFA | 8 | ARS-BFGL-NGS-8796 | 5 | 29095603 | LOC510716 | Within | 3.04E-06 | 0.123 |
UFA | 3 | ARS-BFGL-NGS-8796 | 5 | 29095603 | LOC510716 | Within | 1.44E-06 | 0.058 |
SFA/UFA | 22 | ARS-BFGL-NGS-35179 | 5 | 34325053 | SCAF11 | 62336 | 1.21E-05 | 0.493 |
UFA | 20 | ARS-BFGL-NGS-35179 | 5 | 34325053 | SCAF11 | 62336 | 1.43E-05 | 0.579 |
SFA | 17 | ARS-BFGL-NGS-69056 | 5 | 42285835 | CPNE8 | 135184 | 1.11E-05 | 0.449 |
SFA/UFA | 29 | ARS-BFGL-NGS-69056 | 5 | 42285835 | CPNE8 | 135184 | 1.62E-05 | 0.657 |
UFA | 8 | ARS-BFGL-NGS-69056 | 5 | 42285835 | CPNE8 | 135184 | 4.25E-06 | 0.173 |
UFA | 27 | Hapmap52463-rs29025831 | 5 | 45473334 | LOC101905276 | 65002 | 1.93E-05 | 0.784 |
SFA | 11 | Hapmap39862-BTA-74478 | 5 | 85672503 | BCAT1 | 74712 | 6.22E-06 | 0.253 |
SFA/UFA | 6 | Hapmap39862-BTA-74478 | 5 | 85672503 | BCAT1 | 74712 | 2.26E-06 | 0.092 |
UFA | 4 | Hapmap39862-BTA-74478 | 5 | 85672503 | BCAT1 | 74712 | 1.92E-06 | 0.078 |
SFA/UFA | 16 | ARS-BFGL-NGS-99256 | 5 | 104714350 | VWF/ OLR1 | Within/4458707 | 5.47E-06 | 0.222 |
UFA | 12 | ARS-BFGL-NGS-99256 | 5 | 104714350 | VWF/ OLR1 | Within/4458707 | 6.47E-06 | 0.263 |
UFA | 16 | BTB-00246150 | 6 | 20993424 | PPA2 | Within | 9.44E-06 | 0.383 |
SFA/UFA | 34 | Hapmap26001-BTC-038813 | 6 | 44926243 | PPARGC1A | Within | 1.97E-05 | 0.799 |
UFA | 25 | Hapmap26001-BTC-038813 | 6 | 44926243 | PPARGC1A | Within | 1.85E-05 | 0.750 |
UFA | 31 | BTB-00316291 | 7 | 64892251 | SPARC | Within | 2.18E-05 | 0.887 |
SFA | 15 | BTB-00316348 | 7 | 64939808 | ATOX1 | 5940 | 8.62E-06 | 0.350 |
SFA/UFA | 17 | BTB-00316348 | 7 | 64939808 | ATOX1 | 5940 | 6.58E-06 | 0.267 |
UFA | 15 | BTB-00316348 | 7 | 64939808 | ATOX1 | 5940 | 9.25E-06 | 0.375 |
SFA | 9 | BTB-00316650 | 7 | 65098028 | GLRA1 | Within | 6.02E-06 | 0.245 |
SFA/UFA | 18 | BTB-00316650 | 7 | 65098028 | GLRA1 | Within | 7.85E-06 | 0.319 |
UFA | 17 | BTB-00316650 | 7 | 65098028 | GLRA1 | Within | 9.98E-06 | 0.405 |
UFA | 30 | BTB-02040446 | 8 | 30320626 | NFIB | 164574 | 2.16E-05 | 0.878 |
UFA | 22 | Hapmap50126-BTA-83733 | 9 | 55449737 | LOC101907134 | 18763 | 1.73E-05 | 0.702 |
SFA | 24 | BTB-01866513 | 10 | 70231445 | SLC35F4 | Within | 1.73E-05 | 0.701 |
SFA | 29 | BTB-01203179 | 10 | 72694329 | DHRS7 | 53135 | 2.03E-05 | 0.825 |
SFA/UFA | 28 | BTB-01203179 | 10 | 72694329 | DHRS7 | 53135 | 1.61E-05 | 0.653 |
UFA | 10 | BTB-01203179 | 10 | 72694329 | DHRS7 | 53135 | 5.18E-06 | 0.210 |
SFA | 2 | BTB-01332998 | 10 | 73466092 | SLC38A6 | 15901 | 8.08E-08 | 3.28E-03 |
SFA/UFA | 2 | BTB-01332998 | 10 | 73466092 | SLC38A6 | 15901 | 3.54E-07 | 1.44E-02 |
UFA | 2 | BTB-01332998 | 10 | 73466092 | SLC38A6 | 15901 | 4.87E-07 | 1.98E-02 |
SFA | 1 | ARS-BFGL-NGS-4783 | 10 | 73487550 | SLC38A6 | 37359 | 6.07E-08 | 2.46E-03 |
SFA/UFA | 1 | ARS-BFGL-NGS-4783 | 10 | 73487550 | SLC38A6 | 37359 | 2.64E-07 | 1.07E-02 |
UFA | 1 | ARS-BFGL-NGS-4783 | 10 | 73487550 | SLC38A6 | 37359 | 4.01E-07 | 1.63E-02 |
SFA | 7 | BTB-01501723 | 10 | 73655817 | TMEM30B | 6161 | 5.31E-06 | 0.216 |
SFA/UFA | 37 | BTB-01501723 | 10 | 73655817 | TMEM30B | 6161 | 2.28E-05 | 0.924 |
UFA | 34 | BTB-01501723 | 10 | 73655817 | TMEM30B | 6161 | 2.25E-05 | 0.912 |
SFA | 19 | BTB-01079278 | 11 | 57078447 | REG3A | 435723 | 1.39E-05 | 0.565 |
SFA/UFA | 36 | BTB-01079278 | 11 | 57078447 | REG3A | 435723 | 2.12E-05 | 0.859 |
SFA | 23 | BTB-01079350 | 11 | 57107070 | REG3A | 464346 | 1.66E-05 | 0.675 |
SFA | 3 | BTA-119672-no-rs | 11 | 102911946 | AK8 | Within | 1.34E-06 | 0.054 |
SFA/UFA | 10 | BTA-119672-no-rs | 11 | 102911946 | AK8 | Within | 3.77E-06 | 0.153 |
UFA | 7 | BTA-119672-no-rs | 11 | 102911946 | AK8 | Within | 4.03E-06 | 0.164 |
UFA | 18 | BTB-01236909 | 12 | 50295112 | TBC1D4 | 382864 | 1.17E-05 | 0.476 |
UFA | 38 | BTB-01980482 | 12 | 50451289 | TBC1D4 | 226687 | 2.38E-05 | 0.964 |
SFA/UFA | 31 | ARS-BFGL-NGS-70206 | 13 | 48622655 | FERMT1 | Within | 1.65E-05 | 0.670 |
UFA | 37 | ARS-BFGL-NGS-70206 | 13 | 48622655 | FERMT1 | Within | 2.31E-05 | 0.937 |
SFA/UFA | 25 | ARS-BFGL-NGS-57820 | 14 | 1651311 | LOC100294916/ DGAT1 | Within/144114 | 1.41E-05 | 0.572 |
SFA | 5 | ARS-BFGL-NGS-4939 | 14 | 1801116 | DGAT1 | Within | 2.80E-06 | 0.114 |
SFA/UFA | 3 | ARS-BFGL-NGS-4939 | 14 | 1801116 | DGAT1 | Within | 1.15E-06 | 4.65E-02 |
UFA | 9 | ARS-BFGL-NGS-4939 | 14 | 1801116 | DGAT1 | Within | 4.78E-06 | 0.194 |
SFA/UFA | 21 | ARS-BFGL-NGS-107379 | 14 | 2054457 | LOC786966/ DGAT1 | 460/249619 | 1.17E-05 | 0.475 |
SFA/UFA | 13 | ARS-BFGL-NGS-100480 | 14 | 4364952 | TRAPPC9 | Within | 4.68E-06 | 0.190 |
UFA | 14 | ARS-BFGL-NGS-100480 | 14 | 4364952 | TRAPPC9 | Within | 7.52E-06 | 0.305 |
SFA | 16 | ARS-BFGL-NGS-113293 | 14 | 77274386 | SLC2A5 | 3495 | 1.03E-05 | 0.419 |
SFA/UFA | 5 | ARS-BFGL-NGS-113293 | 14 | 77274386 | SLC2A5 | 3495 | 1.41E-06 | 0.057 |
UFA | 19 | ARS-BFGL-NGS-113293 | 14 | 77274386 | SLC2A5 | 3495 | 1.36E-05 | 0.551 |
SFA | 22 | ARS-BFGL-NGS-15481 | 18 | 56611355 | AP2A1/ SPHK2 | Within/889940 | 1.55E-05 | 0.630 |
SFA/UFA | 20 | ARS-BFGL-NGS-15481 | 18 | 56611355 | AP2A1/ SPHK2 | Within/889940 | 9.71E-06 | 0.394 |
UFA | 24 | ARS-BFGL-NGS-15481 | 18 | 56611355 | AP2A1/ SPHK2 | Within/889940 | 1.79E-05 | 0.725 |
SFA | 20 | ARS-BFGL-NGS-75390 | 19 | 4286783 | LOC790351 | 6533 | 1.44E-05 | 0.586 |
SFA/UFA | 19 | ARS-BFGL-NGS-75390 | 19 | 4286783 | LOC790351 | 6533 | 9.64E-06 | 0.391 |
SFA | 6 | ARS-BFGL-NGS-87368 | 19 | 7762820 | C19H17orf67 | 67914 | 3.15E-06 | 0.128 |
SFA/UFA | 9 | ARS-BFGL-NGS-87368 | 19 | 7762820 | C19H17orf67 | 67914 | 3.72E-06 | 0.151 |
UFA | 13 | ARS-BFGL-NGS-87368 | 19 | 7762820 | C19H17orf67 | 67914 | 6.64E-06 | 0.270 |
SFA | 21 | ARS-BFGL-NGS-118339 | 20 | 3347138 | C20H5orf50 | 150804 | 1.54E-05 | 0.627 |
SFA/UFA | 15 | ARS-BFGL-NGS-118339 | 20 | 3347138 | C20H5orf50 | 150804 | 5.31E-06 | 0.215 |
UFA | 23 | ARS-BFGL-NGS-118339 | 20 | 3347138 | C20H5orf50 | 150804 | 1.75E-05 | 0.709 |
SFA/UFA | 24 | BTA-50482-no-rs | 20 | 36336225 | EGFLAM | 157753 | 1.35E-05 | 0.548 |
UFA | 36 | BTA-50482-no-rs | 20 | 36336225 | EGFLAM | 157753 | 2.31E-05 | 0.936 |
SFA | 14 | ARS-BFGL-NGS-116806 | 20 | 36450009 | GDNF | 180881 | 7.68E-06 | 0.312 |
SFA/UFA | 11 | ARS-BFGL-NGS-116806 | 20 | 36450009 | GDNF | 180881 | 3.92E-06 | 0.159 |
UFA | 11 | ARS-BFGL-NGS-116806 | 20 | 36450009 | GDNF | 180881 | 5.23E-06 | 0.212 |
SFA | 30 | ARS-USMARC-Parent-DQ990835-rs29012811 | 20 | 36570529 | GDNF | 60361 | 2.31E-05 | 0.939 |
SFA/UFA | 27 | ARS-USMARC-Parent-DQ990835-rs29012811 | 20 | 36570529 | GDNF | 60361 | 1.56E-05 | 0.632 |
UFA | 35 | ARS-USMARC-Parent-DQ990835-rs29012811 | 20 | 36570529 | GDNF | 60361 | 2.29E-05 | 0.931 |
SFA | 27 | ARS-BFGL-NGS-17676 | 20 | 39017985 | PRLR | 55261 | 1.95E-05 | 0.790 |
SFA/UFA | 23 | ARS-BFGL-NGS-17676 | 20 | 39017985 | PRLR | 55261 | 1.29E-05 | 0.523 |
UFA | 39 | ARS-BFGL-NGS-17676 | 20 | 39017985 | PRLR | 55261 | 2.45E-05 | 0.994 |
SFA/UFA | 38 | ARS-BFGL-NGS-55739 | 20 | 39787788 | C1QTNF3 | Within | 2.38E-05 | 0.965 |
SFA | 25 | BTB-00783271 | 20 | 41201777 | SUB1 | 17036 | 1.73E-05 | 0.702 |
SFA/UFA | 26 | BTB-00783271 | 20 | 41201777 | SUB1 | 17036 | 1.54E-05 | 0.626 |
UFA | 29 | BTB-00783271 | 20 | 41201777 | SUB1 | 17036 | 2.09E-05 | 0.850 |
SFA | 12 | BTB-01583562 | 20 | 55425112 | LOC101905359 | Within | 6.28E-06 | 0.255 |
SFA | 4 | Hapmap44836-BTA-51861 | 21 | 20990602 | ABHD2/ PLIN1 | 8117/512222 | 1.76E-06 | 0.071 |
SFA/UFA | 4 | Hapmap44836-BTA-51861 | 21 | 20990602 | ABHD2/ PLIN1 | 8117/512222 | 1.39E-06 | 0.056 |
UFA | 6 | Hapmap44836-BTA-51861 | 21 | 20990602 | ABHD2/ PLIN1 | 8117/512222 | 2.09E-06 | 0.085 |
UFA | 32 | Hapmap35708-SCAFFOLD316799_27843 | 21 | 25136856 | SH3GL3 | 52052 | 2.21E-05 | 0.896 |
SFA/UFA | 39 | Hapmap33890-BES3_Contig418_1154 | 23 | 40236175 | ATXN1 | Within | 2.39E-05 | 0.968 |
SFA | 28 | ARS-BFGL-BAC-28144 | 25 | 2606575 | LOC788915 | 21466 | 1.96E-05 | 0.795 |
SFA/UFA | 7 | ARS-BFGL-BAC-28144 | 25 | 2606575 | LOC788915 | 21466 | 2.89E-06 | 0.117 |
UFA | 5 | ARS-BFGL-BAC-28144 | 25 | 2606575 | LOC788915 | 21466 | 2.06E-06 | 0.083 |
SFA | 26 | BTA-61650-no-rs | 26 | 41850719 | FGFR2 | Within | 1.91E-05 | 0.776 |
SFA/UFA | 35 | BTA-61650-no-rs | 26 | 41850719 | FGFR2 | Within | 1.98E-05 | 0.802 |
SFA/UFA | 33 | BTB-01926888 | 27 | 16398882 | TRIML2/ ACSL1 | 303782/2110549 | 1.96E-05 | 0.797 |
UFA | 21 | BTB-01926888 | 27 | 16398882 | TRIML2/ ACSL1 | 303782/2110549 | 1.58E-05 | 0.641 |
SFA | 18 | ARS-BFGL-NGS-106901 | 29 | 44372611 | SCYL1 | Within | 1.22E-05 | 0.495 |
SFA/UFA | 30 | ARS-BFGL-NGS-106901 | 29 | 44372611 | SCYL1 | Within | 1.63E-05 | 0.663 |
Note: see note to Table 2.