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. 2014 May 23;9(5):e96186. doi: 10.1371/journal.pone.0096186

Table 6. Genome-wise and suggestive significant SNPs for sum of fatty acid traits.

Trait Rankb SNP Chr. Position(bp) Nearest Gene/Candidate Gene Distance(bp) Raw P_valuea P_value Bonferroni
SFA 13 Hapmap42233-BTA-49670 1 82559884 C1H3orf70/ EHHADH 14106/38733 6.58E-06 0.267
SFA/UFA 14 Hapmap42233-BTA-49670 1 82559884 C1H3orf70/ EHHADH 14106/38733 4.96E-06 0.202
UFA 33 ARS-BFGL-NGS-13938 2 111650859 MOGAT1 / ACSL3 19295/146311 2.25E-05 0.912
SFA 8 Hapmap42304-BTA-73062 5 5049476 KRR1/ OSBPL8 14567/770655 5.51E-06 0.224
SFA/UFA 12 Hapmap42304-BTA-73062 5 5049476 KRR1/ OSBPL8 14567/770655 4.17E-06 0.169
UFA 28 Hapmap42304-BTA-73062 5 5049476 KRR1/ OSBPL8 14567/770655 2.02E-05 0.819
SFA/UFA 32 ARS-BFGL-NGS-38038 5 27992179 NR4A1 Within 1.80E-05 0.731
UFA 26 ARS-USMARC-624 5 28859701 CSRNP2 Within 1.87E-05 0.760
SFA 10 ARS-BFGL-NGS-8796 5 29095603 LOC510716 Within 6.04E-06 0.245
SFA/UFA 8 ARS-BFGL-NGS-8796 5 29095603 LOC510716 Within 3.04E-06 0.123
UFA 3 ARS-BFGL-NGS-8796 5 29095603 LOC510716 Within 1.44E-06 0.058
SFA/UFA 22 ARS-BFGL-NGS-35179 5 34325053 SCAF11 62336 1.21E-05 0.493
UFA 20 ARS-BFGL-NGS-35179 5 34325053 SCAF11 62336 1.43E-05 0.579
SFA 17 ARS-BFGL-NGS-69056 5 42285835 CPNE8 135184 1.11E-05 0.449
SFA/UFA 29 ARS-BFGL-NGS-69056 5 42285835 CPNE8 135184 1.62E-05 0.657
UFA 8 ARS-BFGL-NGS-69056 5 42285835 CPNE8 135184 4.25E-06 0.173
UFA 27 Hapmap52463-rs29025831 5 45473334 LOC101905276 65002 1.93E-05 0.784
SFA 11 Hapmap39862-BTA-74478 5 85672503 BCAT1 74712 6.22E-06 0.253
SFA/UFA 6 Hapmap39862-BTA-74478 5 85672503 BCAT1 74712 2.26E-06 0.092
UFA 4 Hapmap39862-BTA-74478 5 85672503 BCAT1 74712 1.92E-06 0.078
SFA/UFA 16 ARS-BFGL-NGS-99256 5 104714350 VWF/ OLR1 Within/4458707 5.47E-06 0.222
UFA 12 ARS-BFGL-NGS-99256 5 104714350 VWF/ OLR1 Within/4458707 6.47E-06 0.263
UFA 16 BTB-00246150 6 20993424 PPA2 Within 9.44E-06 0.383
SFA/UFA 34 Hapmap26001-BTC-038813 6 44926243 PPARGC1A Within 1.97E-05 0.799
UFA 25 Hapmap26001-BTC-038813 6 44926243 PPARGC1A Within 1.85E-05 0.750
UFA 31 BTB-00316291 7 64892251 SPARC Within 2.18E-05 0.887
SFA 15 BTB-00316348 7 64939808 ATOX1 5940 8.62E-06 0.350
SFA/UFA 17 BTB-00316348 7 64939808 ATOX1 5940 6.58E-06 0.267
UFA 15 BTB-00316348 7 64939808 ATOX1 5940 9.25E-06 0.375
SFA 9 BTB-00316650 7 65098028 GLRA1 Within 6.02E-06 0.245
SFA/UFA 18 BTB-00316650 7 65098028 GLRA1 Within 7.85E-06 0.319
UFA 17 BTB-00316650 7 65098028 GLRA1 Within 9.98E-06 0.405
UFA 30 BTB-02040446 8 30320626 NFIB 164574 2.16E-05 0.878
UFA 22 Hapmap50126-BTA-83733 9 55449737 LOC101907134 18763 1.73E-05 0.702
SFA 24 BTB-01866513 10 70231445 SLC35F4 Within 1.73E-05 0.701
SFA 29 BTB-01203179 10 72694329 DHRS7 53135 2.03E-05 0.825
SFA/UFA 28 BTB-01203179 10 72694329 DHRS7 53135 1.61E-05 0.653
UFA 10 BTB-01203179 10 72694329 DHRS7 53135 5.18E-06 0.210
SFA 2 BTB-01332998 10 73466092 SLC38A6 15901 8.08E-08 3.28E-03
SFA/UFA 2 BTB-01332998 10 73466092 SLC38A6 15901 3.54E-07 1.44E-02
UFA 2 BTB-01332998 10 73466092 SLC38A6 15901 4.87E-07 1.98E-02
SFA 1 ARS-BFGL-NGS-4783 10 73487550 SLC38A6 37359 6.07E-08 2.46E-03
SFA/UFA 1 ARS-BFGL-NGS-4783 10 73487550 SLC38A6 37359 2.64E-07 1.07E-02
UFA 1 ARS-BFGL-NGS-4783 10 73487550 SLC38A6 37359 4.01E-07 1.63E-02
SFA 7 BTB-01501723 10 73655817 TMEM30B 6161 5.31E-06 0.216
SFA/UFA 37 BTB-01501723 10 73655817 TMEM30B 6161 2.28E-05 0.924
UFA 34 BTB-01501723 10 73655817 TMEM30B 6161 2.25E-05 0.912
SFA 19 BTB-01079278 11 57078447 REG3A 435723 1.39E-05 0.565
SFA/UFA 36 BTB-01079278 11 57078447 REG3A 435723 2.12E-05 0.859
SFA 23 BTB-01079350 11 57107070 REG3A 464346 1.66E-05 0.675
SFA 3 BTA-119672-no-rs 11 102911946 AK8 Within 1.34E-06 0.054
SFA/UFA 10 BTA-119672-no-rs 11 102911946 AK8 Within 3.77E-06 0.153
UFA 7 BTA-119672-no-rs 11 102911946 AK8 Within 4.03E-06 0.164
UFA 18 BTB-01236909 12 50295112 TBC1D4 382864 1.17E-05 0.476
UFA 38 BTB-01980482 12 50451289 TBC1D4 226687 2.38E-05 0.964
SFA/UFA 31 ARS-BFGL-NGS-70206 13 48622655 FERMT1 Within 1.65E-05 0.670
UFA 37 ARS-BFGL-NGS-70206 13 48622655 FERMT1 Within 2.31E-05 0.937
SFA/UFA 25 ARS-BFGL-NGS-57820 14 1651311 LOC100294916/ DGAT1 Within/144114 1.41E-05 0.572
SFA 5 ARS-BFGL-NGS-4939 14 1801116 DGAT1 Within 2.80E-06 0.114
SFA/UFA 3 ARS-BFGL-NGS-4939 14 1801116 DGAT1 Within 1.15E-06 4.65E-02
UFA 9 ARS-BFGL-NGS-4939 14 1801116 DGAT1 Within 4.78E-06 0.194
SFA/UFA 21 ARS-BFGL-NGS-107379 14 2054457 LOC786966/ DGAT1 460/249619 1.17E-05 0.475
SFA/UFA 13 ARS-BFGL-NGS-100480 14 4364952 TRAPPC9 Within 4.68E-06 0.190
UFA 14 ARS-BFGL-NGS-100480 14 4364952 TRAPPC9 Within 7.52E-06 0.305
SFA 16 ARS-BFGL-NGS-113293 14 77274386 SLC2A5 3495 1.03E-05 0.419
SFA/UFA 5 ARS-BFGL-NGS-113293 14 77274386 SLC2A5 3495 1.41E-06 0.057
UFA 19 ARS-BFGL-NGS-113293 14 77274386 SLC2A5 3495 1.36E-05 0.551
SFA 22 ARS-BFGL-NGS-15481 18 56611355 AP2A1/ SPHK2 Within/889940 1.55E-05 0.630
SFA/UFA 20 ARS-BFGL-NGS-15481 18 56611355 AP2A1/ SPHK2 Within/889940 9.71E-06 0.394
UFA 24 ARS-BFGL-NGS-15481 18 56611355 AP2A1/ SPHK2 Within/889940 1.79E-05 0.725
SFA 20 ARS-BFGL-NGS-75390 19 4286783 LOC790351 6533 1.44E-05 0.586
SFA/UFA 19 ARS-BFGL-NGS-75390 19 4286783 LOC790351 6533 9.64E-06 0.391
SFA 6 ARS-BFGL-NGS-87368 19 7762820 C19H17orf67 67914 3.15E-06 0.128
SFA/UFA 9 ARS-BFGL-NGS-87368 19 7762820 C19H17orf67 67914 3.72E-06 0.151
UFA 13 ARS-BFGL-NGS-87368 19 7762820 C19H17orf67 67914 6.64E-06 0.270
SFA 21 ARS-BFGL-NGS-118339 20 3347138 C20H5orf50 150804 1.54E-05 0.627
SFA/UFA 15 ARS-BFGL-NGS-118339 20 3347138 C20H5orf50 150804 5.31E-06 0.215
UFA 23 ARS-BFGL-NGS-118339 20 3347138 C20H5orf50 150804 1.75E-05 0.709
SFA/UFA 24 BTA-50482-no-rs 20 36336225 EGFLAM 157753 1.35E-05 0.548
UFA 36 BTA-50482-no-rs 20 36336225 EGFLAM 157753 2.31E-05 0.936
SFA 14 ARS-BFGL-NGS-116806 20 36450009 GDNF 180881 7.68E-06 0.312
SFA/UFA 11 ARS-BFGL-NGS-116806 20 36450009 GDNF 180881 3.92E-06 0.159
UFA 11 ARS-BFGL-NGS-116806 20 36450009 GDNF 180881 5.23E-06 0.212
SFA 30 ARS-USMARC-Parent-DQ990835-rs29012811 20 36570529 GDNF 60361 2.31E-05 0.939
SFA/UFA 27 ARS-USMARC-Parent-DQ990835-rs29012811 20 36570529 GDNF 60361 1.56E-05 0.632
UFA 35 ARS-USMARC-Parent-DQ990835-rs29012811 20 36570529 GDNF 60361 2.29E-05 0.931
SFA 27 ARS-BFGL-NGS-17676 20 39017985 PRLR 55261 1.95E-05 0.790
SFA/UFA 23 ARS-BFGL-NGS-17676 20 39017985 PRLR 55261 1.29E-05 0.523
UFA 39 ARS-BFGL-NGS-17676 20 39017985 PRLR 55261 2.45E-05 0.994
SFA/UFA 38 ARS-BFGL-NGS-55739 20 39787788 C1QTNF3 Within 2.38E-05 0.965
SFA 25 BTB-00783271 20 41201777 SUB1 17036 1.73E-05 0.702
SFA/UFA 26 BTB-00783271 20 41201777 SUB1 17036 1.54E-05 0.626
UFA 29 BTB-00783271 20 41201777 SUB1 17036 2.09E-05 0.850
SFA 12 BTB-01583562 20 55425112 LOC101905359 Within 6.28E-06 0.255
SFA 4 Hapmap44836-BTA-51861 21 20990602 ABHD2/ PLIN1 8117/512222 1.76E-06 0.071
SFA/UFA 4 Hapmap44836-BTA-51861 21 20990602 ABHD2/ PLIN1 8117/512222 1.39E-06 0.056
UFA 6 Hapmap44836-BTA-51861 21 20990602 ABHD2/ PLIN1 8117/512222 2.09E-06 0.085
UFA 32 Hapmap35708-SCAFFOLD316799_27843 21 25136856 SH3GL3 52052 2.21E-05 0.896
SFA/UFA 39 Hapmap33890-BES3_Contig418_1154 23 40236175 ATXN1 Within 2.39E-05 0.968
SFA 28 ARS-BFGL-BAC-28144 25 2606575 LOC788915 21466 1.96E-05 0.795
SFA/UFA 7 ARS-BFGL-BAC-28144 25 2606575 LOC788915 21466 2.89E-06 0.117
UFA 5 ARS-BFGL-BAC-28144 25 2606575 LOC788915 21466 2.06E-06 0.083
SFA 26 BTA-61650-no-rs 26 41850719 FGFR2 Within 1.91E-05 0.776
SFA/UFA 35 BTA-61650-no-rs 26 41850719 FGFR2 Within 1.98E-05 0.802
SFA/UFA 33 BTB-01926888 27 16398882 TRIML2/ ACSL1 303782/2110549 1.96E-05 0.797
UFA 21 BTB-01926888 27 16398882 TRIML2/ ACSL1 303782/2110549 1.58E-05 0.641
SFA 18 ARS-BFGL-NGS-106901 29 44372611 SCYL1 Within 1.22E-05 0.495
SFA/UFA 30 ARS-BFGL-NGS-106901 29 44372611 SCYL1 Within 1.63E-05 0.663

Note: see note to Table 2.