Table 2.
Electronic databases queried for biological annotations during candidate gene plausibility analysis
Resourcea | Annotation(s) provided | URL |
---|---|---|
ABA | Gene expression | http://mouse.brain-map.org/ |
GEO | Gene expression | http://www.ncbi.nlm.nih.gov/geo/ |
SPELL | Predicted co-expression with candidate genes | http://spell.jax.org/ |
AmiGO | Gene Ontology term | http://geneontology.org/ |
GeneWeaver | Pain-related phenotype | http://www.geneweaver.org/ |
PainGenesdb | Pain-related phenotype | http://www.jbldesign.com/jmogil/enter.html |
IPA | Expression | http://www.ingenuity.com/products/pathways_analysis.html |
Pain-related phenotype | ||
IPA canonical pathway | ||
MGD | Expression | http://www.informatics.jax.org/ |
InterPro protein domain | ||
Pain-related phenotype | ||
Gene Ontology term | ||
Mammalian Phenotype term |
aResource abbreviations: ABA Allen Brain Atlas, GEO Gene Expression Omnibus, SPELL Serial Pattern of Expression Levels Locator, IPA Ingenuity Pathway Analysis, MGD Mouse Genome Database