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. Author manuscript; available in PMC: 2014 May 26.
Published in final edited form as: Pac Symp Biocomput. 2010:252–259. doi: 10.1142/9789814295291_0027

Table 1.

The residue types observed in TRiC in the two homologous positions to the two marked thermosome residues in figure 2a.

A Position 1: Unit α D48 Position 2: Unit β R515 A

DDDDDDDDDDDDD D RRRRRRRRRRRRR R
B DDDDDDDDDDDDD D RRRRRRRRRRRRR R B
G MMMLLLLLLLLLL hpb RRRRRRRRRRRRR R G
D DDDDDDDDDDDDD D KKKKKKKRRRKKK [KR] D
E DDDDDDDDDDDDD D KKKKKKKKKKKKK K E
H DDDDDDDDDDDDD D SSSSSSSSGSSSS [SG] H
Q NNNNNNNNNNNNK [NK] RRRSKKRSSSRKR [RSK] Q
Z MMMMVLILILLYL hpb LLLLLLLLLLLLL L Z
a

For each subunit and position the data from 13 different organisms are shown in the order: Bovine, Human, Zebrafish, Ciona, Drosophila, C. Elegans, Arabidopsis, Yeast, Neospora, Candida, Dictyostelium, Plasmodium and Paramecium. The amino acids that occur in each row are shown to the right of that row.

b

“hp” is a conserved hydrophobic position.