Table 2.
Most significant SNP in 6 genome-wide significant regions from BP+SCZ analysis (* denotes novel locus).
| Closest gene | SNP | Position (hg18) | BP+SCZ P | BP P | SCZ P | Het P |
|---|---|---|---|---|---|---|
| CACNA1C | rs1006737 | chr12:2162951..2290787 | 5.53E-13 | 7.43E-08 | 1.65E-06 | 0.85 |
| MHC | rs17693963 | chr6:27337244..33069339 | 3.28E-11 | 4.28E-04 | 3.27E-09 | 0.06 |
| TRANK1 | rs9834970 | chr3:36817627..36935664 | 1.38E-10 | 3.90E-07 | 7.18E-05 | 0.55 |
| MAD1L1 | rs10275045 | chr7:1834618..2305931 | 2.22E-09 | 2.08E-04 | 1.84E-06 | 0.35 |
| PIK3C2A* | rs4356203 | chr11:17023194..17381287 | 6.46E-09 | 7.36E-05 | 2.14E-05 | 0.70 |
| IFI44L | rs4650608 | chr1:78942596..79066403 | 8.30E-09 | 1.22E-05 | 1.77E-04 | 0.76 |