Table 1.
KEGG pathway enrichment analysis
ID | KEGG pathway | Number of genes | Number of genes in pathway | P-value | FDRa |
---|---|---|---|---|---|
hsa05200 | Pathways in cancer | 158 | 327 | 5.74 × 10–48 | 1.11 × 10–45 |
hsa05215 | Prostate cancer | 59 | 89 | 8.83 × 10–28 | 8.57 × 10–26 |
hsa05219 | Bladder cancer | 33 | 42 | 9.62 × 10–20 | 6.22 × 10–18 |
hsa05212 | Pancreatic cancer | 44 | 70 | 1.30 × 10–19 | 6.31 × 10–18 |
hsa04510 | Focal adhesion | 82 | 200 | 4.58 × 10–19 | 1.78 × 10–17 |
hsa05222 | Small-cell lung cancer | 46 | 85 | 8.39 × 10–17 | 2.62 × 10–15 |
hsa05220 | Chronic myeloid leukemia | 42 | 73 | 9.45 × 10–17 | 2.62 × 10–15 |
hsa05210 | Colorectal cancer | 38 | 62 | 1.46 × 10–16 | 3.55 × 10–15 |
hsa04110 | Cell cycle | 58 | 128 | 3.74 × 10–16 | 8.07 × 10–15 |
hsa04350 | TGF-beta signaling pathway | 44 | 85 | 3.55 × 10–15 | 6.89 × 10–14 |
hsa05223 | Non-small-cell lung cancer | 33 | 54 | 1.72 × 10–14 | 3.04 × 10–13 |
hsa04115 | p53 signaling pathway | 38 | 69 | 2.01 × 10–14 | 3.25 × 10–13 |
hsa04210 | Apoptosis | 44 | 89 | 3.12 × 10–14 | 4.66 × 10–13 |
hsa05214 | Glioma | 36 | 65 | 7.85 × 10–14 | 1.09 × 10–12 |
hsa05213 | Endometrial cancer | 31 | 52 | 2.86 × 10–13 | 3.70 × 10–12 |
hsa05218 | Melanoma | 37 | 71 | 4.46 × 10–13 | 5.41 × 10–12 |
hsa05142 | Chagas’ disease (American trypanosomiasis) | 46 | 104 | 1.37 × 10–11 | 1.57 × 10–11 |
hsa05221 | Acute myeloid leukemia | 31 | 58 | 1.53 × 10–11 | 1.65 × 10–10 |
hsa04380 | Osteoclast differentiation | 50 | 128 | 4.04 × 10–11 | 4.12 × 10–10 |
hsa04012 | ErbB signaling pathway | 39 | 87 | 4.39 × 10–11 | 4.26 × 10–10 |
The table shows the results of the hypergeometric test of KEGG pathways.
aFDR, false discovery rate.