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. Author manuscript; available in PMC: 2015 Jan 3.
Published in final edited form as: J Proteome Res. 2013 Jul 17;13(1):21–28. doi: 10.1021/pr400294c

Figure 4.

Figure 4

(a) Shows a novel gene area where two peptides are identified in a non-genomic region. (b) Two peptides with alternative splice junctions. Peptide T.LNVNGQE:IVYSMENEK.L is supported by 13 split mapped RNA-seq reads, and R.EIKK:QHTSFQVSGPKEEIVYSMENEK.L is supported by 40 reads. (c) Peptide ‘TIVFTVPLSQCQMVSPMISK.E’ matches in a different frame compared to the gene eef-2. Two neighboring peptides, ‘R.FIEPIEDIPSGNIAGLVGVDQYL:S.R’, and ‘G.HVFEESQVTGTPMFVV:R.L’ are identified with 1 bp deletion, that allow for the frame-shift to occur.

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