Table 1.
mvp wheat biotic stress regulated genes identified by microarray
| Affymetrix probesets ID |
GenBank accession | UniProt and NCBI description | Fold change |
|---|---|---|---|
| Ta.3976.2.S1_x_at | CA679100 | Triticum aestivum flavanone 3-hydroxylase mRNA, partial cds | 6.713 |
| Ta.18574.1.A1_x_at | CK196896 | Ice recrystallization inhibition protein 4 (Fragment) n=1 Tax=Triticum aestivum RepID=B9VR51_WHEAT | 5.807 |
| Ta.3976.1.S1_at | CA678526 | Triticum aestivum flavanone 3-hydroxylase mRNA, partial cds | 5.510 |
| Ta.27327.1.S1_x_at | BT009360 | Pathogenesis-related 1a n=1 Tax=Triticum monococcum RepID=Q3S4I4_TRIMO | 5.467 |
| Ta.959.1.S1_at | CA721939 | Thaumatin-like protein n=3 Tax=Triticum RepID=Q41584_WHEAT | 5.147 |
| Ta.221.1.S1_at | AF112963 | Chitinase II n=1 Tax=Triticum aestivum RepID=Q9XEN3_WHEAT | 4.725 |
| Ta.27762.1.S1_x_at | AF384146 | Pathogenesis-related protein 1A/1B n=10 Tax=Triticeae RepID=PR1A_HORVU | 4.714 |
| Ta.24501.1.S1_at | CD863039 | Pathogenesis-related protein 1A/1B n=10 Tax=Triticeae RepID=PR1A_HORVU | 4.689 |
| Ta.22619.1.S1_at | CA687670 | Pathogenesis-related protein 10 n=1 Tax=Hordeum vulgare RepID=Q84QC7_HORVU | 4.186 |
| Ta.22619.1.S1_x_at | CA687670 | Pathogenesis-related protein 10 n=1 Tax=Hordeum vulgare RepID=Q84QC7_HORVU | 4.053 |
| TaAffx.104812.1.S1_s_at | BJ223744 | Lipoxygenase 2.1, chloroplastic n=1 Tax=Hordeum vulgare RepID=LOX21_HORVU | 4.031 |
| TaAffx.28302.2.S1_at | CA695754 | Dirigent-like protein n=2 Tax=Oryza sativa RepID=Q53NP6_ORYSJ | 4.006 |
| Ta.1967.1.S1_x_at | CK152466 | Lipoxygenase 2.1, chloroplastic n=1 Tax=Hordeum vulgare RepID=LOX21_HORVU | 3.927 |
| Ta.1967.2.A1_x_at | AJ614579 | Lipoxygenase 2.1, chloroplastic n=1 Tax=Hordeum vulgare RepID=LOX21_HORVU | 3.691 |
| Ta.23322.2.S1_at | CA640491 | Thaumatin-like protein TLP8 n=1 Tax=Hordeum vulgare RepID=Q946Y8_HORVU | 3.672 |
| Ta.224.1.S1_at | AF112966 | Chitinase IV n=1 Tax=Triticum aestivum RepID=Q9XEN6_WHEAT | 3.375 |
| TaAffx.107480.1.S1_at | CA679967 | Ice recrystallization inhibition protein 5 n=1 Tax=Deschampsia antarctica RepID=C0L702_DESAN | 3.357 |
| TaAffx.128595.1.S1_at | CK216241 | Putative vacuolar defence protein n=2 Tax=Triticum aestivum RepID=Q6PWL8_WHEAT | 3.294 |
| Ta.2709.1.S1_s_at | CK166154 | Defensin-like protein 2 n=1 Tax=Triticum aestivum RepID=DEF2_WHEAT | 3.188 |
| Ta.30921.1.S1_x_at | CN012317 | 12-oxo-phytodienoic acid reductase n=1 Tax=Zea mays RepID=Q49HE1_MAIZE | 2.948 |
| Ta.7022.1.S1_s_at | BJ281221 | Phenylalanine ammonia-lyase n=5 Tax=Poaceae RepID=Q7F929_ORYSJ | 2.868 |
| TaAffx.137429.1.S1_at | CA610138 | Dehydrin 5 (Fragment) n=1 Tax=Hordeum vulgare subsp. spontaneum RepID=Q6V7D2_HORSP | 2.645 |
| Ta.7022.2.S1_at | BF199967 | Phenylalanine ammonia-lyase n=1 Tax=Triticum aestivum RepID=PALY_WHEAT | 2.604 |
| Ta.25077.1.A1_at | BQ161103 | Ice recrystallization inhibition protein 2 n=1 Tax=Triticum aestivum RepID=Q56B89_WHEAT | 2.580 |
| Ta.7022.2.S1_x_at | BF199967 | Phenylalanine ammonia-lyase n=1 Tax=Triticum aestivum RepID=PALY_WHEAT | 2.569 |
| Ta.21556.1.S1_at | CA684533 | Protein WIR1B n=1 Tax=Triticum aestivum RepID=WIR1B_WHEAT | 2.505 |
| Ta.25026.1.S1_at | BQ804965 | Dehydrin n=1 Tax=Triticum turgidum subsp. durum RepID=Q5CAQ2_TRITU | 2.504 |
| Ta.21768.1.S1_x_at | CA701727 | Ice recrystallization inhibition protein 7 n=1 Tax=Deschampsia antarctica RepID=C0L704_DESAN | 2.475 |
| Ta.16472.1.S1_s_at | CA606887 | Pathogenesis-related protein n=1 Tax=Hordeum vulgare RepID=P93181_HORVU | 2.418 |
| Ta.12663.1.S1_at | CK197682 | Ice recrystallization inhibition protein 1 n=1 Tax=Triticum aestivum RepID=Q56B90_WHEAT | 2.334 |
| TaAffx.128418.43.S1_at | BJ252866 | Endochitinase n=5 Tax=Pooideae RepID=Q41539_WHEAT | 2.324 |
| Ta.28659.3.S1_x_at | CA689419 | Putative protease inhibitor n=1 Tax=Hordeum vulgare RepID=Q96465_HORVU | 2.317 |
| Ta.22678.1.A1_a_at | CK214868 | Chitinase 1 n=2 Tax=Andropogoneae RepID=B4FBN8_MAIZE | 2.294 |
| TaAffx.45277.1.S1_x_at | BJ231180 | Phenylalanine ammonia-lyase n=1 Tax=Triticum aestivum RepID=PALY_WHEAT | 2.263 |
| Ta.2278.2.S1_a_at | CK196331 | Chitinase IV n=1 Tax=Triticum aestivum RepID=Q9XEN6_WHEAT | 2.254 |
| Ta.2278.3.S1_x_at | CD490414 | Chitinase II n=1 Tax=Triticum aestivum RepID=Q9XEN3_WHEAT | 2.234 |
| Ta.27389.2.S1_x_at | BJ297034 | Defensin-like protein 2 n=1 Tax=Triticum aestivum RepID=DEF2_WHEAT | 2.202 |
| Ta.2278.2.S1_x_at | CK196331 | Chitinase IV n=1 Tax=Triticum aestivum RepID=Q9XEN6_WHEAT | 2.086 |
| Ta.12820.1.S1_at | CK215415 | Defensin n=1 Tax=Triticum turgidum subsp. durum RepID=C9E1C6_TRITU | -2.245 |
| Ta.28133.1.A1_s_at | CA636835 | Dirigent-like protein, expressed n=2 Tax=Oryza sativa RepID=Q2R0I1_ORYSJ | -2.438 |
| Ta.7963.2.S1_x_at | CK215257 | Dirigent-like protein, expressed n=2 Tax=Oryza sativa RepID=Q2R0I1_ORYSJ | -2.584 |
| Ta.7388.2.S1_x_at | BU672305 | Jasmonate-induced protein n=2 Tax=Triticum aestivum RepID=A7LM74_WHEAT | -2.636 |
| Ta.7108.1.S1_at | CF134173 | Ice recrystallization inhibition protein 2 n=1 Tax=Triticum aestivum | -3.427 |
| TaAffx.98064.1.A1_at | BQ168859 | Ice recrystallization inhibition protein 3 n=1 Tax=Deschampsia antarctica | -4.022 |
| Ta.7388.1.S1_at | BJ320233 | Jasmonate-induced protein n=2 Tax=Triticum aestivum RepID=A7LM74_WHEAT | -7.187 |
| Ta.7388.2.S1_a_at | BU672305 | Jasmonate-induced protein n=2 Tax=Triticum aestivum RepID=A7LM74_WHEAT | -7.230 |
The annotation is made according to Affymetrix Gene Chip® wheat genome array of the 46 differentially regulated biotic stress probeset IDs complemented with BLAST results showing the Genbank accession number, UniProt or NCBI description and is presented in decreasing order of differential expression of ≥2-fold and ≤–2-fold cut off.