Table 2.
Enrichment of GO terms in the 1105 genes differentially expressed in the callus 3, 7, 14, and 28 d after grafting between the heterograft CS/RG and the autograftContingency gives the number of genes (i) in the BIN in the input list, (ii) in the background (microarray), (iii) not in the BIN in input list, and (iv) not in the background. P-values adjusted with Bonferroni.
| GO accession number | Term type | Term | Contingency | Adjusted P-value |
|---|---|---|---|---|
| GO:0005576 | C | Extracellular region | 106–1139–672–17 499 | 2E-10 |
| GO:0005615 | C | Extracellular space | 37–255–741–18 452 | 2E-07 |
| GO:0044421 | C | Extracellular region part | 37–271–741–18 436 | 7E-07 |
| GO:0030312 | C | External encapsulating structure | 43–468–735–18 233 | 4E-04 |
| GO:0016020 | C | Membrane | 305–6073–473–12 366 | 0.026 |
| GO:0003824 | F | Catalytic activity | 491–9610–287–8643 | 6E-06 |
| GO:0016491 | F | Oxidoreductase activity | 130–1836–648–16 758 | 8E-06 |
Key: F, molecular function and C, cellular compartment.