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. 2014 May 23;7:314. doi: 10.1186/1756-0500-7-314

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Copyright © 2014 Onsongo et al.; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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The Galaxy analysis pipeline. The URL gives a link to a virtual machine on the amazon cloud that runs the analysis pipeline. Galaxy interface is configured to make the CLIA certified workflows accessible as tools under the tools pane (left pane). The center pane shows results for one of the QC analyses (coverage plot outlining percent of bases with different levels of coverage). The right pane is a history of all the tools and the order in which they were executed by the pipeline together their results.