Table 2. Genetic diversity indices and neutrality tests (Fu's Fs and Tajima's D) in the mtCOI-5′ (barcode) sequences of 21 mosquito species from Pakistan.
Species | n | S | k | π | h | Hd | Fu's Fs | Tajima's D |
Ae. aegypti | 48 | 5 | 0.27 | 0.0004 | 5 | 0.22 | −3.95 | −1.90 |
Ae. albopictus | 182 | 6 | 0.43 | 0.0010 | 7 | 0.38 | −3.88 | −1.22 |
Ae. unilineatus | 7 | 7 | 2.87 | 0.0055 | 5 | 0.86 | −1.26 | −1.03 |
Ae. w-albus | 9 | 7 | 1.89 | 0.0031 | 5 | 0.80 | −0.73 | −1.00 |
Aedes MA01 | 9 | 13 | 4.83 | 0.0073 | 8 | 0.97 | −2.82 | 0.05 |
Aedes MA02 | 4 | 6 | 3.00 | 0.0046 | 3 | 0.83 | 0.731 | −0.81 |
Aedini 1 | 5 | 6 | 2.80 | 0.0043 | 4 | 0.90 | −0.445 | −0.19 |
Ar. subalbatus | 54 | 3 | 0.27 | 0.0004 | 4 | 0.27 | −2.17 | −1.18 |
An. culicifacies | 5 | 7 | 2.80 | 0.0042 | 5 | 1.00 | −2.37 | −1.16 |
An. pulcherrimus | 8 | 2 | 0.50 | 0.0008 | 3 | 0.46 | −0.99 | −1.31 |
An. peditaeniatus | 8 | 7 | 2.25 | 0.0034 | 6 | 0.93 | −2.32 | −0.79 |
An. stephensi | 28 | 3 | 0.21 | 0.0005 | 4 | 0.21 | −3.27 | −1.73 |
An. subpictus | 39 | 24 | 3.10 | 0.0052 | 17 | 0.87 | −8.14 | −1.84 |
Co. pseudotaeniatus | 11 | 23 | 10.1 | 0.0154 | 6 | 0.89 | 1.59 | 0.72 |
Cx. bitaeniorhynchus | 4 | 1 | 0.50 | 0.0008 | 2 | 0.50 | 0.17 | −0.61 |
Cx. fuscocephala | 5 | 4 | 2.00 | 0.0030 | 4 | 0.90 | −1.01 | 0.27 |
Cx. quinquefasciatus | 1018 | 23 | 0.09 | 0.0002 | 24 | 0.09 | −64.4 | −2.31 |
Cx. tritaeniorhynchus | 89 | 33 | 2.78 | 0.0057 | 33 | 0.90 | −27.08 | −1.88 |
Ma. uniformis | 4 | 4 | 2.33 | 0.0038 | 4 | 1.00 | −1.62 | 0.65 |
Oc. pulcritarsis | 72 | 32 | 4.74 | 0.0076 | 37 | 0.96 | −25.58 | −1.04 |
Ph. cogilli | 48 | 19 | 3.16 | 0.0074 | 18 | 0.89 | −7.36 | −0.86 |
n: number of sequences; S: number of polymorphic sites; k: average number of pairwise nucleotide differences; π: nucleotide diversity; h; number of haplotypes; Hd: haplotype diversity.
Fu's Fs: A negative value of FS is evidence for an excess number of alleles, as would be expected from a recent population expansion or from genetic hitchhiking. Statistical significance: Not significant, P>0.02.
Tajima's D: A negative Tajima's D signifies an excess of low frequency polymorphisms relative to expectation. Statistical significance: Not significant, P>0.10.
Species represented by <3 specimens or barcodes with <500 bp were not included in the analyses.