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. 2003 Sep;13(9):2018–2029. doi: 10.1101/gr.1507303

Table 4.

Divergence of One of the Two Flagella Gene Clusters in the Y. pseudotuberculosis Strains

354 (O:1b) Pa3606 (O:1b) YPIII pIB1 (O:3) 83 (O:3) Pa3423 (O:3) 197 (O:5) 141 (O:7) wla872 (O:7) SP93422 (O:15) SP940616 (O:15)
YPO0714 Flagellar M-ring protein fliF + + - + + + + + + 0.75
YPO0715 Flagellar motor switch protein fliG + + - + + + + + + 0.75
YPO0716 Flagellar assembly protein fliH + + + + + + + + + 0.75
YPO0717 Flagellum-specific ATP-synthase fliI + + + + + + 0.75 + + 0.65
YPO0718 Hypothetical protein + + + + + + + + + +
YPO0719 Hypothetical protein + 0.3 + + 0.4 0.75 + + + 0.75
YPO0720 Putative flagellar regulatory protein 0.7 0.3 + + 0.3 + + 0.7 + 0.75
YPO0721 Basal body P-ring formation protein flgA 0.7 0.5 + + 0.6 + 0.65 + 0.7 0.7
YPO0722 Basal body rod protein flgB 0.7 0.6 + + 0.7 0.7 0.6 0.6 0.6 0.6
YPO0723 Basal body rod protein flgC + 0.7 + + + 0.75 0.7 + 0.75 0.65
YPO0724 Basal body rod modification protein flgD 0.7 0.6 + + 0.5 0.6 0.6 0.7 0.7 0.5
YPO0725 Flagellar hook protein flgE 0.5 0.5 + - 0.35 0.4 0.4 0.45 0.4 0.25
YPO0727f1 Basal body rod protein flgF + 0.5 + - 0.55 0.55 + + 0.5 0.45
YPO0728 Basal body rod protein flgG + + + - 0.5 0.5 0.6 0.7 0.45 0.4
YPO0729 Flagellar L-ring protein flgH + 0.6 + - 0.7 0.7 0.75 0.7 0.6 0.5
YPO0730 Flagellar P-ring protein flgI 0.4 0.55 + - 0.5 0.6 + + 0.4 0.4
YPO0731 Putative flagellar protein flgJ 0.5 + + - 0.55 0.55 0.6 + 0.55 0.6
YPO0732 Flagellar hook-associated protein flgK 0.3 0.65 + - + 0.35 0.5 0.6 0.65 0.6
YPO0733 Flagellar hook-associated protein flgL 0.3 0.55 + - 0.75 0.4 0.55 0.6 0.55 0.6
YPO0734 Hypothetical protein + + + 0.4 + 0.6 + + + +
YPO0735 Hypothetical protein + 0.7 + 0.75 0.7 + 0.7 + + 0.65
YPO0736 Putative regulatory protein + + + + + 0.65 0.75 + + +
YPO0737 Flagellin flaA1 0.25 0.3 + 0.2 0.3 0.35 0.35 0.5 0.3 0.5
YPO0738 Flagellin flaA2 0.45 0.4 + 0.4 0.4 0.4 0.3 0.5 0.3 0.55
YPO0739 Flagellin flaA3 0.45 0.4 + 0.4 0.45 0.45 0.3 0.45 0.3 0.6
YPO0740 Flagellar hook-associated protein fliD 0.6 0.5 + - 0.65 0.55 0.5 0.6 0.6 0.6
YPO0741 Putative flagellar protein fliS + + + - + + + + + +
YPO0742 Hypothetical protein 0.55 0.7 + - 0.7 0.75 0.7 + 0.65 0.6
YPO0743 Flagellar hook length control protein fliK + 0.75 + 0.75 0.75 0.75 0.7 0.7 0.7 0.65
YPO0744 Flagellar biogenesis protein 0.6 0.55 + - 0.65 0.7 0.6 0.75 0.7 0.55
YPO0745 RNA polymerase flagellar sigma factor fliA 0.65 + - - 0.7 + 0.7 + + 0.7
YPO0746 Chemotaxis protein motA + + + + + + + + + +
YPO0747 Chemotaxis protein motB + + + + + + + + + 0.75
YPO0748 Hypothetical protein + + + + + 0.75 0.7 + 0.7 0.7
YPO0749 Hypothetical protein 0.35 0.4 + + 0.4 0.4 0.35 0.4 0.3 0.3

Hybridization of the highly variable flagellar region by Y. pseudotuberculosis strains. Strain names are followed by their serotype in parentheses. The presence of a gene is indicated by a plus sign (+), absence by a minus sign, (-), and divergence by the signal to control ratio represented numerically.