Table 5.
Homologs of Mouse CD-Containing Proteins in Human, Fly, and Worm
| No. | Family | Protein | Human homolog | D. melanogaster homologs | C. elegans homologs |
|---|---|---|---|---|---|
| 1 | CHD | Chd1 | Chd1 | Chd1 (Stokes et al. 1996) | Chd-1 (Accession no. NP_491994) |
| 2 | Chd2 (novel) | Chd2 (novel) | No fly homolog | No worm homolog | |
| 3 | Chd3/4-Mi2a (novel) | CHD3 (Mi2α) | 2 Chd3/4 proteins (Accession nos. NP_649154 and NP_649111) | Chd3, Chd4 (Let-418) (Solari and Ahringer 2000; von Zelewsky et al. 2000) | |
| 4 | Chd3/4-Mi2b (novel) | CHD4 (Mi2β) | |||
| 5 | Chd3/4-Mi2c (novel) | CHD3/4 | |||
| 6 | Chd5a (novel) | Chd5 | Kismet (Daubresse et al. 1999) | Chd-5 (Accession no. NP_491426) | |
| 7 | Chd5b (novel) | Chd5 | |||
| 8 | Chd5c (novel) | Chd5 | |||
| 9 | Chd5d (novel) | Chd5 | |||
| 10 | Histone methyltransferase | Suv39h1 | SUV39H1 | Su(var)3-9 (Tschiersch et al. 1994) | No worm homolog |
| 11 | Suv39h2(Riken) | SUV39H2 | |||
| 12 | HP1 | HP1α | HP1α | HP1a | Hpl-1, Hpl-2 (Accession nos. NP_510199 [Hpl-1] and NP_499373 [Hpl-2]) |
| 13 | HP1β | HP1β | HP1b | ||
| 14 | HP1γ | HP1γ | HP1c | ||
| 15 | HP1γ (pseudogene) | HP1γ | (Platero et al. 1995; Singh et al. 1991) | ||
| 16 | HP1γ (pseudogene) | No human homolog | |||
| 17 | HP1γ homolog (novel) | No human homolog | |||
| 18 | Polycomb | Cbx6 | Cbx6 homolog | Polycomb (Pc) (Messmer et al. 1992) | No worm homolog |
| 19 | Cbx2 (M33) | Cbx2 homolog (novel) | |||
| 20 | Cbx4 (MPc2) | Cbx4 homolog | |||
| 21 | Cbx8 (MPC3) | Cbx8 homolog | |||
| 22 | Pc homolog Cbx7 (novel) | Cbx7 | |||
| 23 | Msl-3 homologs | Msl-3 homolog | Msl3-like 1 isoform d | Msl-3 (Gorman et al. 1995) | Ce-1/MRG-1 (Fujita et al. 2002) |
| 24 | Tex189/MRG15 | MRG15 | MRG15 (Bertram and Pereira-Smith 2001) | ||
| 25 | Tex189/MRG15(pseudogene) | No human homolog | |||
| 26 | Transcription factor-like (novel) | No human homolog | No fly homolog | ||
| 27 | Transcription factor-like (novel) | No human homolog | No fly homolog | ||
| 28 | Histone acetyltransferase | MYST1 | MYST1 | Mof (Hilfiker et al. 1997) | VC5.4, K03D10.3 (Accession nos. NP_504796 [VC5.4] and NP_493467 [K03D10.3]) |
| 29 | Tip60 homolog | Tip60 | |||
| 30 | Retinoblastoma binding | RBBP1 | RBBP1 | No fly homolog | No worm homolog |
| 31 | protein-1 | RBPB1-related (novel) | RBP1-related protein | ||
| 32 | Enoyl-CoA hydratase | EnoylCoA protein (ECH) | EnoylCoA (novel) | No fly homolog | No worm homolog |
| 33 | Cdyl | CDYL | |||
| 34 | No mouse homolog | CDY1 | |||
| 35 | No mouse homolog | CDY1 | |||
| 36 | No mouse homolog | CDY2 (pseudogene) | |||
| 37 | No mouse homolog | CDY2 (pseudogene) | |||
| 38 | SWI3 | SRG3 (SMARCC1) | SMARCC1 homolog (novel) | Moira (Crosby et al. 1999) | No worm homolog |
| 39 | SMARCC2 homolog (novel) | SMARCC2 | |||
| 40 | Ankyrin family | ANK protein (MPP8) | MPP8 | No fly homolog | No worm homolog |
References of fly and worm proteins are given where available. Numbers in the first colum refer to mouse genes assigned throughout this article