Table 1.
Clustering of FANTOM2 Sequences
| Sequence groupa | Total groups |
|---|---|
| RIKEN Clusters | 35,957 |
| NCBI UniGene Clusters | 37,782 |
| TIGR Clusters | 45,538 |
| Cluster Unions | 34,526 |
| MGI-associated Cluster Unions | 16,475 |
| MGI Genes | 19,980b |
| RTPS6.3 TUs | 33,409 |
a
Sequence Groups include FANTOM2 sequences that were not grouped with other FANTOM2 sequences (i.e., singletons)
b
The MGI gene number represents genes associated with FANTOM2 sequences after the FANTOM2 load into the MGI database. Many (18,794) FANTOM2 sequences were not associated with MGI genes at load time