Table 2.
Cluster Consistency and Number Codes for MGI-Associated FANTOM2 Clones
| Category | Description | RIKEN status code | RIKEN number code | MGI status code | MGI number code | Total clones |
|---|---|---|---|---|---|---|
| 1 | Singletons: clones unclustered with other clones | RNT | 1,1,1 | RNT | 1,1,1 | 7743 |
| 2 | The same set of clones in each cluster view, and the same single MGI gene represented in each cluster view | RNT | not 1,1,1 | RNT | 1,1,1 | 6769 |
| 3 | Different clones among the three cluster views, but the same single MGI gene represented in the three views | not RNT | * | RNT | 1,1,1 | 6875 |
| 4 | Different clones among the three cluster views, but the same set of MGI genes represented in the three views | not RNT | * | RNT | not 1,1,1 | 903 |
| 5 | The same set of clones in each cluster view, but different MGI genes represented among the three cluster views | RNT | * | not RNT | * | 1187 |
| 6 | Different clones among the three cluster views, but at least two cluster views do not represent an MGI gene | not RNT | * | not RNT | *,0,0 or 0,*,0 or 0,0,* | 3874 |
| 7 | Different clones among the three cluster views, but at least two cluster views represent a single MGI gene | not RNT | * | not RNT | *,1,1 or 1,*,1 or 1,1,* | 6603 |
| 8 | Different clones among the three cluster views, and multiple different MGI genes are represented | not RNT | * | not RNT | all remaining | 2780 |
*
Any value (wildcard)