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letter
. 2003 Sep;13(9):2112–2117. doi: 10.1101/gr.586803

Table 1.

Comparison of Strategies A and B for Fine Mapping the Location of the Disease Mutation in 100 Data Sets Simulated Based on the Cystic Fibrosis Data

LD mapping algorithm Strategy Mean(pos)a Std(pos)b Mean 95% PI widthc RMSEd Overlape
BLADE A 0.8600 0.0145 0.1461 0.0262 99%
B 0.8647 0.0315 0.1402 0.0349 96%
DHSMap A 0.8868 0.0428 0.2141 0.0432 96%
B 0.9072 0.0702 0.1620 0.0749 66%
a

The average of the 100 location estimates in the 100 simulations (true location = 0.88 cM).

b

The sample standard deviation of the 100 location estimates.

c

The average width of the 95% probability intervals (PIs) in the 100 simulations.

d

Root mean square error (RMSE): square root of the average squared differences between the estimated and the true location, i.e., RMSE = Inline graphic, where θ is the true location and Inline graphic is the location estimate based on the ith simulated data set.

e

The percentage of times (in the 100 simulations) that the 95% PI overlapped with the target region.