Table 1.
LD mapping algorithm | Strategy | Mean(pos)a | Std(pos)b | Mean 95% PI widthc | RMSEd | Overlape |
---|---|---|---|---|---|---|
BLADE | A | 0.8600 | 0.0145 | 0.1461 | 0.0262 | 99% |
B | 0.8647 | 0.0315 | 0.1402 | 0.0349 | 96% | |
DHSMap | A | 0.8868 | 0.0428 | 0.2141 | 0.0432 | 96% |
B | 0.9072 | 0.0702 | 0.1620 | 0.0749 | 66% |
The average of the 100 location estimates in the 100 simulations (true location = 0.88 cM).
The sample standard deviation of the 100 location estimates.
The average width of the 95% probability intervals (PIs) in the 100 simulations.
Root mean square error (RMSE): square root of the average squared differences between the estimated and the true location, i.e., RMSE = , where θ is the true location and is the location estimate based on the ith simulated data set.
The percentage of times (in the 100 simulations) that the 95% PI overlapped with the target region.