Table 2.

Predicted Functional Modality of Some Candidate CRP Sites

Target gene and its function	5′-end position	|E/μ|	Center position	Function
caiT (probable carnitine transporter)	42,068	1.2885	−81	Activator
gcd (glucose dehydrogenase)	141,284	1.2981	−33	Repressor
ybiS (ORF, hypothetical protein)	855,062	1.2974	−49	Repressor
b0822 (hypothetical protein)	859,296	1.2939	−42	Activator
infA (protein chain initiation factor IF-1)	925,739	1.2538	−49	Repressor
ycfR (ORF, hypothetical protein)	1,168,209	1.4563	12	Repressor
ychH (ORF, hypothetical protein)	1,257,909	1.2855	−22	Repressor
ydaK (putative transcriptional regulator LYSR-type)	1,402,612	1.3117	−42	Activator
b1729 (ORF a kinase)	1,808,868	1.3186	−70	Activator
yeaA (ORF, hypothetical protein)	1,860,569	1.3720	−90	Activator
sbmC (sbmC protein)	2,079,356	1.2815	−19	Repressor
cdd (cytidine/deoxycytidine deaminase)	2,229,786	1.3090	−42	Activator
dsdC (D-serine dehydratase transcriptional activator)	2,475,713	1.3129	−61	Activator
glk (glucokinase)	2,507,541	1.2551	−93	Activator
b2448 (hypothetical protein)	2,561,441	1.2958	−42	Activator
b2736 (dehydrogenase)	2,859,363	1.3783	−42	Activator
ygcW (putative oxidoreductase)	2,898,417	1.3203	−42	Activator
agaR (putative transcriptional regulator of aga operon)	3,276,436	1.3410	−82	Activator
yhcR (ORF, hypothetical protein)	3,387,118	1.3304	−19	Repressor
yhhZ (ORF, hypothetical protein)	3,579,344	1.2537	−42	Activator
dctA (uptake of C4-dicarboxylic acids)	3,681,199	1.2778	−46	Repressor
xylA (D-xylose isomerase)	3,728,507	1.2835	−28	Repressor
tnaL (tryptophanase leader peptide)	3,885,970	1.3238	−6	Repressor
kdgT (2-keto-3-deoxy-D-gluconate transport system)	4,099,091	1.3754	−42	Activator
yjcB (ORF, hypothetical protein)	4,272,748	1.5685	−13	Repressor
yjfA (ORF, hypothetical protein)	4,445,847	1.2498	7	Repressor
idnK (gluconate kinase, thermosensitive glucokinase)	4,492,034	1.3262	−42	Activator
yjhl (putative regulator)	4,523,465	1.2595	−22	Repressor