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letter
. 2003 Aug;13(8):1828–1837. doi: 10.1101/gr.1125403

Table 5.

The Gene Recommender Is More Precise Than the Gene Expression Topomap

Size
Precisione
Query Na Gen. Rec.b Topomapc Randd Gen. Recall Topomap Random
Retinoblastoma 5 6 138 160 50% 2% 2%
Recombination/Repairf 6 57 1271 85 5% 0% 4%
Synap complex 6 4 246 85 75% 1% 4%
MSP 43 32 225 4017 69% 10% 1%

MSP, major sperm protein

a

Number of genes in the query

b

Number of genes found by the gene recommender at 50% recall

c

Number of genes found by the gene expression topomap at 50% recall

d

Number of genes found by the gene recommender from a set of random genes at 50% recall

e

Percent of genes in the list at 50% recall that are from the query list

f

This group is known to be comprised of two distinct subgroups, and hence resulted in a hit list with lower precision