Table 2.
The Effect of Tuple Length
ℓ | G/4ℓ | ĉ1 | % Unique | ĉ2 | % Repeat1 | ĉ3 | % Repeat2 | Ĝ |
---|---|---|---|---|---|---|---|---|
9 | 3.1e-001 | 3.14 | 49 | 12.17 | 34 | 38.97 | 17 | 76433 |
10 | 7.6e-002 | 3.03 | 52 | 12.08 | 31 | 38.65 | 17 | 79207 |
11 | 1.9e-002 | 3.00 | 53 | 12.07 | 31 | 38.49 | 16 | 79980 |
12 | 4.8e-003 | 2.99 | 53 | 12.04 | 31 | 38.36 | 16 | 80268 |
13 | 1.2e-003 | 2.98 | 53 | 12.02 | 31 | 38.29 | 16 | 80537 |
14 | 3.0e-004 | 2.97 | 53 | 11.99 | 31 | 38.22 | 16 | 80808 |
15 | 7.5e-005 | 2.97 | 53 | 11.97 | 31 | 38.14 | 16 | 80808 |
16 | 1.9e-005 | 2.96 | 53 | 11.94 | 31 | 38.06 | 16 | 81081 |
17 | 4.7e-006 | 2.96 | 53 | 11.91 | 31 | 37.98 | 16 | 81081 |
18 | 1.2e-006 | 2.96 | 53 | 11.89 | 31 | 37.90 | 16 | 81081 |
19 | 2.9e-007 | 2.95 | 53 | 11.86 | 31 | 37.82 | 16 | 81356 |
20 | 7.3e-008 | 2.95 | 53 | 11.84 | 31 | 37.74 | 16 | 81356 |
21 | 1.8e-008 | 2.94 | 53 | 11.81 | 31 | 37.66 | 16 | 81633 |
22 | 4.5e-009 | 2.94 | 53 | 11.79 | 31 | 37.58 | 16 | 81633 |
23 | 1.1e-009 | 2.93 | 53 | 11.76 | 31 | 37.50 | 16 | 81911 |
24 | 2.8e-010 | 2.93 | 53 | 11.73 | 31 | 37.42 | 16 | 81911 |
ĉ1, ĉ2 and ĉ3 are estimates of the average number of occurrences (in the reads) of the first, second, and third family of tuples, respectively. Here, the first family of tuples are unique ones. The numbers under the column named unique, repeat1, and repeat2 are the percentages of sequences that belong to the unique part, the first repeat family, and the second repeat family, respectively