Table 3.
The Effect of the Number of Families
| k | ĉ1 | % (1) | ĉ2 | % (2) | ĉ3 | % (3) | ĉ4 | % (4) | ĉ5 | % (5) | Ĝ |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4.81 | 100 | 48684 | ||||||||
| 2 | 3.07 | 56 | 16.84 | 44 | 78175 | ||||||
| 3 | 2.98 | 53 | 12.02 | 31 | 38.29 | 16 | 80537 | ||||
| 4 | 2.98 | 51 | 2.98 | 2 | 12.02 | 31 | 38.29 | 16 | 80537 | ||
| 5 | 2.98 | 51 | 2.98 | 2 | 12.02 | 23 | 12.02 | 8 | 38.29 | 16 | 80537 |
The numbers under ĉ1, ĉ2, ĉ3, ĉ4, and ĉ5 are the average number of occurrences (in the reads) of the first, second, third, fourth and fifth family of tuples, respectively. The numbers under (1), (2), (3), (4) and (5) are the percentages of ℓ-tuples from the first, second, third, fourth, and fifth family of tuples, respectively. Ĝ is the estimated genome length. In all experiments, ℓ = 11