Table 2.

Results on Chromosome 21 With TSSs Determined Based on Mapped Full-Length cDNA Sequences From DBTSS (Sugano Laboratory)

	TP	FP	Total # of TSSs	Total # of predictions	Se	ppv	ASM	CC
Dragon GSF	62	17	89	383	0.6966	0.7848	1.2727	0.7394
FirstEF	74	108	89	1236	0.8315	0.4066	3.7273	0.5814
FirstEF (CpG+)	69	58	89	746	0.7753	0.5433	2.6364	0.6490
Eponine	46	16	89	816	0.5169	0.7419	2.3636	0.6193

The maximum allowed distance between the predicted TSS and real TSS is 2000 nt