Table 1.

Performance of Fourier Spectrum Measures on All Experimental Exons and All Noncoding Strands of Length Greater Than 50 bp in S. cerevisiae, Using Different Window Sizes

	% of exons detected for 10% false positive
Measure	90 bp	120 bp	180 bp	240 bp	300 bp	351 bp
Spectral Rotation	84.5	88.0	90.8	91.9	92.7	93.0
Optimized spectral content (Anastassiou 2000)	82.1	86.0	89.3	91.0	91.7	92.2
Spectral content (Tiwari et al. 1997)	76.0	79.4	86.3	89.4	90.0	90.4
G Rotation	83.3	86.2	89.6	90.4	90.8	90.7