Table 3. Root mean square deviations I for Ca overlays.
| Structure | RMSD (Å) |
|---|---|
| 1XSE_a | 1.146 |
| 1XSE_b | 1.147 |
| 3DWF_a | 0.982 |
| 3DWF_b | 0.957 |
| 3DWF_c | 1.032 |
| 3DWF_d | 0.962 |
| 3G49_a | 1.003 |
| 3G49_b | 1.018 |
| 3G49_c | 0.983 |
| 3G49_d | 1.027 |
| 1Y5M_a | 0.989 |
| 1Y5M_b | 1.002 |
| 1Y5R_a | 1.001 |
| 1Y5R_b | 1.035 |
For each protein chain (indicated by the lowercase letter) in each crystal structure, the Cα atoms were superimposed onto those of the human 2ILT_a structure and the root mean square deviation was calculated using the Sybyl software [101]. 2ILT_a was used as the reference structure simply because it is the only structure of 11β-HSD1 with only one protein molecule in the crystal structure. The 1XSE, 3DWF and 3G49 structures are of the guinea pig protein and the 1Y5M and 1Y5R structures are of the mouse protein.