Table 2.
Overview of observed variants by nucleotide.
Observed number of variantsa |
Number of nucleotideb | Variant intensityc | |||||
---|---|---|---|---|---|---|---|
ref\var | A | G | C | T | Total | ||
A | - | 383 | 23 | 19 | 425 (32%) | 4785 (31%) | 1.03 |
G | 228 | - | 7 | 2 | 237 (18%) | 2017 (13%) | 1.35 |
C | 31 | 13 | - | 239 | 283 (21%) | 4810 (31%) | 0.68 |
T | 13 | 16 | 367 | - | 396 (30%) | 3833 (25%) | 1.19 |
Total | 272 | 412 | 397 | 260 | 1341 | 15,446 |
Observed number of different variants according to the revised Cambridge Reference Sequence (rCRS).
The number of nucleotide x in the mtDNA excluding the displacement loop (position 577-16023).
Variant intensity is calculated as follows: (observed number of variants nucleotide x/total number of nucleotide x)/(total number of variants/total number of nucleotides).