Table 1. Strains and plasmids.
Strains/Plasmids | Genotype | Source |
Plasmids | ||
pGFPamy | ‘amyE cat LIC promoterless gfpmut3 amyE’ bla ColE1 origin | [9] |
pYFPamy | ‘amyE cat LIC promoterless iyfp amyE’ bla ColE1 origin | [9] |
pCFPamy | ‘amyE cat LIC promoterless cfpBs amyE’ bla ColE1 origin | [9] |
pGFPbglS | bglS′ LIC promoterless gfpmut3 nptIII ′bglS bla ColE1 origin f1(+)origin | [9] |
pGFP_Star | ‘amyE cat TgyrA LIC promoterless gfpmut3 amyE’ bla ColE1 origin | This study |
pYFP_Star | ‘amyE cat TgyrA LIC promoterless iyfp amyE’ bla ColE1 origin | This study |
pCFP_Star | ‘amyE cat TgyrA LIC promoterless cfpBs amyE’ bla ColE1 origin | This study |
pGFP_Star_P rapE | ‘amyE cat TgyrA PrapE-gfpmut3 amyE’ bla ColE1 origin | This study |
pGFPamy_P rapE | ‘amyE cat PrapE-gfpmut3 amyE’ bla ColE1 origin | This study |
Strains | ||
E. coli | ||
DH5α | F− φ80lacZΔM15 Δ(lacZYA-argF)U169 recA1 endA1 hsdR17(rk−, mk+) phoA supE44 thi-1 gyrA96 relA1 λ− | Invitrogen |
BW25113 | F− Δ(araD-araB)567 ΔlacZ4787(::rrnB-3) λ− rph-1 Δ(rhaD-rhaB)568 hsdR514 | [35]; Gift of Karl Kochanowski |
BW25113_pUA139 | F− Δ(araD-araB)567 ΔlacZ4787(::rrnB-3) λ− rph-1 Δ(rhaD-rhaB)568 hsdR514 nptII promoterless gfpmut2 sc101 origin | Strain [35]; Plasmid [1]; Gift of Karl Kochanowski |
B. subtilis | ||
168 1A700 | trpC2 | Gift of Oscar Kuipers |
168_pGFPamy * | trpC2 amyE:: promoterless gfpmut3 cat | This study |
168_pYFPamy * | trpC2 amyE:: promoterless iyfp cat | This study |
168_pCFPamy * | trpC2 amyE:: promoterless cfpBs cat | This study |
168_pGFP_Star * | trpC2 amyE:: TgyrA promoterless gfpmut3 cat | This study |
168_pYFP_Star * | trpC2 amyE:: TgyrA promoterless iyfp cat | This study |
168_pCFP_Star * | trpC2 amyE:: TgyrA promoterless cfpBs cat | This study |
168_pGFPbglS | trpC2 bglS:: promoterless gfpmut3 nptIII | This study |
168_P rapE-gfp (Star) * | trpC2 amyE:: TgyrA PrapE-gfpmut3 cat | This study |
168_P rapE-gfp (amy) * | trpC2 amyE:: PrapE-gfpmut3 cat | This study |
* two independent clones are used for this study.