Table 3. Elements included in the pBASE and pFAST vector platforms.
Category | Element | Template | Reference/Source |
Promoters | CMV | pcDNA3.1(+) | Invitrogen |
PGK | pSUPERIOR.puro | Oligoengine | |
SV40 | pcDNA3.1(+) | Invitrogen | |
Terminators | BGH pA | pcDNA3.1(+) | Invitrogen |
SV40 pA | pcDNA3.1(+) | Invitrogen | |
hGH pA | pFLAG-CMV | Sigma | |
Marker cassettes | HygR | pcDNA3.1/Hygro(+) | Invitrogen |
NeoR | pcDNA3.1(+) | Invitrogen | |
DHFR | pIRES-DHFR | In house/GenBank: BC005796 | |
Targeting signals | NLS (nuclear) | Synthetic | [17] |
PTS1 (peroxisomal) | Synthetic | [18] | |
c-Ha-ras (plasma membrane) | Synthetic | [19]–[20] | |
COX-VIII (mitochondrial) | Synthetic | [21] | |
CRT (ER) | Synthetic | [22] | |
KDEL (ER retention signal) | Synthetic | [23] | |
GalNacT1 (medial-Golgi) | Synthetic | [24] | |
β-1,4 GT (trans-Golgi) | Synthetic | [25] | |
α-2,6 ST (TGN) | Synthetic | [26]–[27] | |
Secretion signals | hIFN-γ | Synthetic | [28]–[29] |
Proteins | eGFP | peGFP-1 | Clontech |
eYFP | peYFP-C1 | Clontech | |
eCFP | peCFP-C1 | Clontech | |
mCherry | pmCherry-N1 | Clontech | |
SEAP | pGEM-4Z/PLAP489 | [14] | |
Other elements | IRES | pIRES-DHFR | In house |
Vector backbone | pU0002 | [13] | |
His-tag | Synthetic | [30] | |
FLAG-tag | Synthetic | Invitrogen | |
c-Myc-tag | Synthetic | Invitrogen |
α-2,6 ST: N-terminal targeting signal of beta-galactoside alpha-2,6-sialyltransferase; β-1,4 GT: N-terminal targeting signal of beta-1,4-galactosyltransferase; c-Ha-ras: C-terminal targeting signal of c-Ha-ras p21 protein; COX-VIII: N-terminal targeting signal of cytochrome c oxidase subunit VIII; CRT: N-terminal targeting signal of calreticulin; ER: endoplasmic reticulum; GalNAcT1: N-terminal targeting signal of N-acetylgalactosaminyltransferase; hIFN-γ: human Interferon-gamma; NLS: C-terminal nuclear localization sequence; PTS1: C-terminal peroxisomal target signal 1; TGN: trans-Golgi network.