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. 2014 May 30;9(5):e96693. doi: 10.1371/journal.pone.0096693

Table 3. Elements included in the pBASE and pFAST vector platforms.

Category Element Template Reference/Source
Promoters CMV pcDNA3.1(+) Invitrogen
PGK pSUPERIOR.puro Oligoengine
SV40 pcDNA3.1(+) Invitrogen
Terminators BGH pA pcDNA3.1(+) Invitrogen
SV40 pA pcDNA3.1(+) Invitrogen
hGH pA pFLAG-CMV Sigma
Marker cassettes HygR pcDNA3.1/Hygro(+) Invitrogen
NeoR pcDNA3.1(+) Invitrogen
DHFR pIRES-DHFR In house/GenBank: BC005796
Targeting signals NLS (nuclear) Synthetic [17]
PTS1 (peroxisomal) Synthetic [18]
c-Ha-ras (plasma membrane) Synthetic [19][20]
COX-VIII (mitochondrial) Synthetic [21]
CRT (ER) Synthetic [22]
KDEL (ER retention signal) Synthetic [23]
GalNacT1 (medial-Golgi) Synthetic [24]
β-1,4 GT (trans-Golgi) Synthetic [25]
α-2,6 ST (TGN) Synthetic [26][27]
Secretion signals hIFN-γ Synthetic [28][29]
Proteins eGFP peGFP-1 Clontech
eYFP peYFP-C1 Clontech
eCFP peCFP-C1 Clontech
mCherry pmCherry-N1 Clontech
SEAP pGEM-4Z/PLAP489 [14]
Other elements IRES pIRES-DHFR In house
Vector backbone pU0002 [13]
His-tag Synthetic [30]
FLAG-tag Synthetic Invitrogen
c-Myc-tag Synthetic Invitrogen

α-2,6 ST: N-terminal targeting signal of beta-galactoside alpha-2,6-sialyltransferase; β-1,4 GT: N-terminal targeting signal of beta-1,4-galactosyltransferase; c-Ha-ras: C-terminal targeting signal of c-Ha-ras p21 protein; COX-VIII: N-terminal targeting signal of cytochrome c oxidase subunit VIII; CRT: N-terminal targeting signal of calreticulin; ER: endoplasmic reticulum; GalNAcT1: N-terminal targeting signal of N-acetylgalactosaminyltransferase; hIFN-γ: human Interferon-gamma; NLS: C-terminal nuclear localization sequence; PTS1: C-terminal peroxisomal target signal 1; TGN: trans-Golgi network.