Table 5.
Comparison of the number of detected genes in the 38 samples shared between all platforms
| Gene symbol | nCounter® | BioMark HD™ | OpenArray® |
|---|---|---|---|
| ABCB4 | 1 (3%) | 31 (82%) | 18 (47%) |
| FDXR | D | 37 (97%) | 36 (95%) |
| OR5B21 | 0 (0%) | D | 37 (97%) |
| ADAM20 | 11 (29%) | D | 35 (92%) |
| HIST1H3J | 36 (95%) | D | 36 (95%) |
| GDF11 | 30 (79%) | D | D |
| LY96 | D | D | 36 (95%) |
| TLR6 | 36 (95%) | D | D |
| CD86 | 33 (87%) | D | 36 (95%) |
| FASN | D | D | 37 (97%) |
| PFAS | D | D | 36 (95%) |
| MAPK13 | 37 (97%) | D | D |
| GDAP2 | D | D | 36 (95%) |
| TMEM97 | 35 (92%) | D | D |
| DHX33 | 35 (92%) | D | D |
| RFC2 | D | D | 37 (97%) |
| ACLY | D | D | 35 (92%) |
| TXNRD1 | D | D | 37 (97%) |
| HPRT1 | D | D | 37 (97%) |
| GAPDH | D | D | 37 (97%) |
The set of 33 transcripts were measured in the 38 chemical stimulations shared between all platforms. The table illustrates the number of detected calls for a specific transcript across the 38 samples with percentage in parentheses. Table lists only transcripts declared as undetected in any of the stimulations on either nCounter®, BioMark HD™ or OpenArray®. D denotes that transcript is present in all samples.