Table 1. Overview of modifiers of polyglutamine aggregation (see Table 3 for full list of genes).
Cellular process (no. of genes)* | Function (no. of genes)*† | Cosmid no. | Gene example | Gene description | Mammalian homologue |
---|---|---|---|---|---|
RNA synthesis and processing (38) | Synthesis (14) | F36A4.7 | ama-1 | Largest subunit of RNA polymerase II | RPB1 |
Splicing (19) | T13H5.4 | phi-9 | Putative U2 snRNP-associate splicing factor | SAP61/SF3a60 | |
Protein synthesis (53) | Initiation (5) | Y39G10AR.8 | eif-2 | Translation initiation factor elF2 | elF-2-γ |
Elongation (4) | F25H5.4 | eft-2 | Elongation factor 2 | eEF1A-2 | |
Ribosomal subunit (40) | F39B2.6 | rps-26 | Ribosomal protein S26 | 40S ribosomal protein S26 | |
Protein folding (10) | Chaperonin (6) | C07G2.3 | cct-5 | Homologue chaperonin TCP-1, subunit 5 (ε) | TCP-1-ε |
Hsp70 (2) | C37H5.8 | hsp-6 | Member of the heat-shock HSP70 protein family | GRP75 | |
DnaJ (1) | F18C12.2 | rme-8 | Heat-shock protein DnaJ, N-terminal | Unknown | |
Protein transport (25) | Vesicle (14) | C39F7.4 | rab-1 | GTP-binding protein of the rab family | RAB-1A |
Nuclear import (5) | C53D5.6 | imb-3 | Putative karyopherin β | Importin β-3 subunit | |
Cytoskeleton (6) | C36E8.5 | tbb-2 | Member of the β-tubulin protein family | Tubulin β-2 chain | |
Protein degradation (14) | 19S (4) | F56H1.4 | rpt-5 | Putative ATPase subunit of the 19S regulatory complex | 26S protease regulatory subunit 6A |
20S (7) | C36B1.4 | pas-4 | Putative α4 20S proteasome core subunit | Proteasome subunit α type 7 | |
Ubiquitin like (1) | F52C6.3 | phi-37 | Member of the ubiquitin family | Ubiquitin C | |
E1 Ub-activating enzyme (1) | C47E12.5 | uba-1 | Similarity to ubiquitin-activating enzyme E1 | Ubiquitin activating enzyme E1 | |
Other (46) | ATP synthesis (6) | H28O16.1 | phi-44 | Putative ATP synthase | ATP synthase α chain mitochondrial precursor |
Number of genes found in the indicated categories
Major functional groups from each category of cellular process