Table 1. Effect of UV light on the expression of known p53-responsive genes.
Expression | UV, J/m2 | n | Median gene size, bp | mRNA size, log2 bp | Gene size, log2 bp | Gene size, bp† | Total intron size, log2 bp |
---|---|---|---|---|---|---|---|
Random‡ | NA | 132 | 29,104 | 11.1 ± 0.1 | 14.6 ± 0.2 | 24,800 | 14.4 ± 0.2 |
p53 induced | All | 43 | 13,751 | 11.1 ± 0.1 | 14.0 ± 0.2 | 16,500 | 13.7 ± 0.3 |
0 | 33 | 23,036 | 11.1 ± 0.1 | 14.1 ± 0.3 | 17,600 | 13.8 ± 0.3 | |
10 | 32 | 11,934 | 11.1 ± 0.1 | 13.7 ± 0.3 * | 13,300 | 13.5 ± 0.3 * | |
30 | 18 | 8,176 | 10.8 ± 0.2 | 13.2 ± 0.3 ** | 9,400 | 12.8 ± 0.3 ** |
Asterisks indicate that the indicated value is significantly different from randomly selected genes using a Student's test at *, P ≤ 0.05 or **, P ≤ 0.005. NA, not applicable.
For clarity, mean gene size is presented in a linear form but was determined from the mean of transformed values by using the following formula: (mean gene size = 2meanlog2 gene size).
A random number generator was used to generate a random series of Locuslink accession numbers.