Table 2. Combination motif scores.
Each iteration shows the motif that was added and the exclusions applied to that glycan. The Exclusions column gives the ID of the excluded motifs and the number of excluded glycans in square brackets. The names of the excluded motifs are given at the bottom of the table.
Itr | Score | Gain | Glycans | ID | Motif | Exclusions |
---|---|---|---|---|---|---|
0 | 5.99 | - | 109 | 19 | Terminal Galactose AnyLinkage | 180 [21]; 85 [28]; 40 OR 13 [1]; 185 [4] |
1 | 10.39 | 4.40 | 68 | 23 | Terminal GalNAcb | 168 OR 94 [8] |
2 | 11.03 | 0.65 | 61 | 107 | Tn Antigen | |
3 | 11.21 | 0.18 | 62 | 59 | Terminal GlcNAca1-6 | |
4 | 11.37 | 0.16 | 63 | 25 | GalNAcb 4′ Substituted | |
5 | 11.49 | 0.11 | 64 | 121 | Core 6 O-glycan | |
6 | 11.55 | 0.07 | 65 | 189 | Forssman Antigen (GalNAca1-3GalNAcb) Not Blood Group A | |
7 | 11.61 | 0.06 | 66 | 188 | Gala1-3Gal Not Blood Group B | |
8 | 11.67 | 0.06 | 67 | 161 | Blood Group H Type 3 | |
9 | 11.72 | 0.05 | 68 | 207 | MDPLys | |
10 | 11.76 | 0.04 | 69 | 181 | Phosphorylated Glycans | |
11 | 11.79 | 0.03 | 70 | 155 | Blood Group B Type 2 | |
12 | 11.82 | 0.03 | 70 | 31 | GalNAca 4′ Substituted | |
13 | 11.87 | 0.05 | 71 | 207 | MDPLys | 51 [2] |
14 | 11.90 | 0.04 | 72 | 166 | Blood Group I GlcNAcb1-3(GlcNAcb1-6)Galb | |
15 | 11.92 | 0.01 | 73 | 91 | Rhamnose Anywhere | |
16 | 11.93 | 0.01 | 74 | 186 | Internal Gala1-4Galb | 94 OR 95 [1] |
ID | Excluded Motifs |
---|---|
180 | Sulfated Glycans |
85 | Fuca1-2 |
40 | Glcb 6′ Substituted |
13 | Terminal Gala1-6 |
185 | Terminal Gala1-4Galb |
168 | Blood Group Sd(a), CAD (GalnAcb1-4(Siaa2-3)Gal) |
94 | Neu5Aca2-3 Anywhere |
51 | Terminal GlcNAcb1-4 |
94 | Neu5Aca2-3 Anywhere |
95 | Terminal Neu5Aca2-3 |