Table 1.
Primers used for PCR amplification and sequencing.
| Gene | Primer name | Sequence | Expected product size (bp) |
|---|---|---|---|
|
| |||
| 16S rRNA | T50a | GTTACGACTTCACCCTCCT | 1488 |
| FD3a | AGAGTTTGATCCTGGCTTAG | ||
| Rec 4a | ATGCTAGAAACTGCATGA | ||
| Rec 9a | TCGTCTGAGTCCCCATCT | ||
| 16RnaLb | CTGGCAGTGCGTCTTAAGCA | ||
| 16RnaRb | GTATTCACCGTATCATTCTGATATAC | ||
| 16S−2a | TACAGGTGCTGCATGGTTGTCG | ||
| 16S−1a | TAGAAGTTCGCCTTCGCCTCTG | ||
|
| |||
| glpQ | glpQF+1a | GGGGTTCTGTTACTGCTAGTGCCATTAC | 1002 |
| Rev−2a | CAATACTAAGACCAGTTGCTCCTCCGCC | ||
| glpQF−1a | CAATTTTAGATATGTCTTTACCTTGTTGTTTATGCC | ||
| Rev−1a | GCACAGGTAGGAATGTTGGAATTTATCCTG | ||
|
| |||
| flaB | Fla ans 5′a | TGTGATATCCTTTTAAAGAGACAAATGG | 1284 |
| Fla alt 3′a | TCTAAGCAATGACAATACATATTGAGG | ||
| flaLLb | ACATATTCAGATGCAGACAGAGGT | ||
| flaRLb | GCAATCATAGCCATTGCAGATTGT | ||
| flaLSb | AACAGCTGAAGAGCTTGGAATG | ||
| flaRSb | CTTTGATCACTTATCATTCTAATAGC | ||
|
| |||
| hpt | hptdegFc | GCAGAYATTACAAGAGARATGG | 433 |
| hptdegRc | CYTCRTCACCCCATTGAGTTCC | ||
|
| |||
| Tick 16S rRNA | Tick16S+1d | CTGCTCAATGATTTTTTAAATTGCTGTGG | 480 |
| Tick16S−1d | CCGGTCTGAACTCAGATCAAGT | ||
| Tick16S+2d | TTGGGCAAGAAGACCCTATGAA | ||
| Tick16S−2d | TTACGCTGTTATCCCTAGAG | ||
| Tick16S+3d | ATACTCTAGGGATAACAGCGT | ||
| Tick16S−3d | AAATTCATAGGGTCTTCTTGTC | ||
|
| |||
| Tick 12S rRNA | SR-J-14199e | TACTATGTTACGACTTAT | 430 |
| SR-N-14594e | AAACTAGGATTAGATACCC | ||
Amplification primers in bold; all primers used for sequencing.
this study.