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. 2014 May 29;15:161. doi: 10.1186/1471-2105-15-161

Table 1.

Predicted antigenic sites and their lengths using Bepipred [29]and IEDB [28]analysis tools

Bepipred analysis
IEDB analysis
Peptide Length (aa) Peptide Length (aa)
VRPGNFNQ
8
DYKVQLFEKYFKY
13
GNAAIT
6
HANCVNCTDDRCVLHCANFNVLFAM
25
DKSAGHPFN
9
KTCFGPIVRKIFVDGVPFVVSCGYHYKELGLV
32
SYQEQ
5
VSLHRHRLSLK
11
DVDNP
5
ADPAMHI
7
YPKCDRA
7
SSNAFLDLRTSCFSVAALTTG
21
YYVKPGGTSSGDATTAY
17
YDFVVSKG
8
 
 
SVTLKHFFFA
10
 
 
DYNYYSYN
8
 
 
PTMCDIKQMLFCMEVVNKYFEI
22
 
 
DGGCLNASEVVVNN
14
 
 
KARVYYESM
9
 
 
LKYAIS
6
 
 
TVAGVSILS
9
 
 
GATCVIGTT
9
 
 
LKTLYKDV
8
 
 
YPKCDRA
7
 
 
CRIFASLILARKHGTCCTT
19
 
 
YRLANECAQVLSEYVLCGGGYYVKPG
26
 
 
ANSVFNILQA
10
    TANVSAL 7