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. 2014 May 21;15(1):391. doi: 10.1186/1471-2164-15-391

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© Bäckdahl et al.; licensee BioMed Central Ltd. 2014

This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited.

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Sequence similarities/differences between DA, E3 and PVG. Similarity is given as the percentage of SNVs shared between combinations of strains out of all SNVs, after excluding 1.01 M positions where at least one strain is heterozygous or has a coverage below 3. The number of SNVs kept for the analysis was 4166021. Total numbers of SNVs are in parenthesis.