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. 2014 Jun 3;5:244. doi: 10.3389/fpls.2014.00244

Table 1.

List of significant studies performed to develop SNP markers and subsequent genotyping using different technological platforms in soybean.

Sr. No Genotyping platform/Approach Genotypes SNPs References
1 Illumina GoldenGate assay 3 RIL mapping populations 384 Hyten et al., 2008
2 Illumina Infinium SoySNP6K BeadChip 92 RILs 5376 Akond et al., 2013
3 Illumina genome analyzer/Reduced Representation Libraries (RRLs) 5 diverse genotypes 14,550 Varala et al., 2011
4 Illumina GoldenGate assay 3 RIL mapping populations 1536 Hyten et al., 2010b; Vuong et al., 2010
5 Illumina genome analyzer /RRLs 444 RILs 25,047 Hyten et al., 2010a
6 Illumina GAIIx/Genotyping by sequencing (GBS) 8 diverse genotypes 10,120 Sonah et al., 2013
7 Illumina Genome Analyzer II/whole genome re-sequencing 17 wild and 14 cultivated 2,05,614 Lam et al., 2010
8 Illumina Genome Analyzer II/whole genome re-sequencing 25 diverse genotypes 51,02,244 Li et al., 2013
9 Illumina genome analyzer/RRLs Parental lines of mapping population 39,022 Wu et al., 2010
10 Illumina Infinium BeadChip 96 each of landraces, elite cultivars and wild accessions 52,041 Song et al., 2013