Table 1.
Sr. No | Genotyping platform/Approach | Genotypes | SNPs | References |
---|---|---|---|---|
1 | Illumina GoldenGate assay | 3 RIL mapping populations | 384 | Hyten et al., 2008 |
2 | Illumina Infinium SoySNP6K BeadChip | 92 RILs | 5376 | Akond et al., 2013 |
3 | Illumina genome analyzer/Reduced Representation Libraries (RRLs) | 5 diverse genotypes | 14,550 | Varala et al., 2011 |
4 | Illumina GoldenGate assay | 3 RIL mapping populations | 1536 | Hyten et al., 2010b; Vuong et al., 2010 |
5 | Illumina genome analyzer /RRLs | 444 RILs | 25,047 | Hyten et al., 2010a |
6 | Illumina GAIIx/Genotyping by sequencing (GBS) | 8 diverse genotypes | 10,120 | Sonah et al., 2013 |
7 | Illumina Genome Analyzer II/whole genome re-sequencing | 17 wild and 14 cultivated | 2,05,614 | Lam et al., 2010 |
8 | Illumina Genome Analyzer II/whole genome re-sequencing | 25 diverse genotypes | 51,02,244 | Li et al., 2013 |
9 | Illumina genome analyzer/RRLs | Parental lines of mapping population | 39,022 | Wu et al., 2010 |
10 | Illumina Infinium BeadChip | 96 each of landraces, elite cultivars and wild accessions | 52,041 | Song et al., 2013 |