Table V.
SNP | Gene | Chr | SNP location | Allelic change | MAF | Overall | |||
---|---|---|---|---|---|---|---|---|---|
Best model | HR (95% CI)a | P value | q value | ||||||
rs4135385 | CTNNB1 | 3 | Intron | A>G | 0.25 | Recessive | 3.74 (2.23–6.29) | 6.02×10−7 | 1.43× 10−4 |
rs10898563 | FZD4 | 11 | 3′ UTR | A>G | 0.35 | Recessive | 2.29 (1.60–3.28) | 5.19×10−6 | 3.46×10−4 |
rs503022 | WNT5A | 3 | 3′ flanking | C>A | 0.16 | Recessive | 4.34 (2.30–8.18) | 5.82×10−6 | 3.46×10−4 |
rs629537b | WNT5A | 3 | 3′ flanking | G>A | 0.16 | Recessive | 4.34 (2.30–8.18) | 5.82×10−6 | 3.46×10−4 |
rs11658976 | WNT3 | 17 | Intron | A>G | 0.40 | Recessive | 1.89 (1.31–2.73) | 6.43×10−4 | 0.0306 |
rs3765351 | WNT4 | 1 | 3′ UTR | A>G | 0.44 | Recessive | 1.82 (1.28–2.59) | 9.24×10−4 | 0.0366 |
rs713065 | FZD4 | 11 | 3′ UTR | A>G | 0.37 | Dominant | 0.63 (0.47–0.85) | 0.0022 | 0.0752 |
Underlined bold numbers denote significant association at q < 0.1. MAF, minor allele frequency; UTR, untranslated region.
aAdjusted for sex, age, race, clinical stage, pack year tobacco history and treatment regimen.
bShowed linkage with rs503022, r 2 = 0.99.