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. Author manuscript; available in PMC: 2015 Jan 1.
Published in final edited form as: Caries Res. 2014;48(4):330–338. doi: 10.1159/000356299

Figure 2.

Figure 2

LocusZoom plots for regions of interest. (a) Genome-wide significant locus in KPNA4 for dfsPF; (b) Suggestive locus in ITGAL for dfsSM; (c) Suggestive locus near PLUNC family genes for dfsSM; (d) Suggestive locus in MPPED2 for dfsPF; (e) Suggestive locus near AJAP1 for dfsSM; (f) Suggestive locus near RPS6KA2 for dfsSM. Negative log10-transformed p values and physical positions for SNPs in the regions are shown. The recombination rate overlay as well as colors indicating linkage disequilibrium between the top SNP (purple) and other SNPs are based on 1000 Genomes CEU data (hg18). The rug plot indicates regional SNP density. Gene positions and directions of transcription are annotated. Circles represent genotyped SNPs, and triangles represent imputed SNPs.