Table 5.
Empirical power when the multiple traits were correlated with a CS structure with correlation coefficient r = 0.3, and non-zero βj ~ U(0.2, 0.3). An independence working correlation structure was used in GEE.
GEE |
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MDMR |
SPU(γ) |
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SNP | #traits | Average | MultiPhen | TATES | L 1 | L 2 | MANOVA | Score | UminP | γ = 1 | 2 | 3 | 4 | 5 | 6 | ∞ | aSPU |
l | 5 | 0.664 | 0.468 | 0.551 | 0.653 | 0.652 | 0.469 | 0.468 | 0.531 | 0.660 | 0.658 | 0.636 | 0.609 | 0.597 | 0.569 | 0.533 | 0.632 |
10 | 0.263 | 0.574 | 0.452 | 0.441 | 0.506 | 0.576 | 0.573 | 0.437 | 0.267 | 0.501 | 0.460 | 0.493 | 0.472 | 0.481 | 0.444 | 0.456 | |
20 | 0.114 | 0.535 | 0.335 | 0.202 | 0.245 | 0.536 | 0.535 | 0.330 | 0.114 | 0.249 | 0.261 | 0.330 | 0.321 | 0.348 | 0.345 | 0.305 | |
30 | 0.084 | 0.458 | 0.283 | 0.126 | 0.158 | 0.462 | 0.456 | 0.282 | 0.085 | 0.162 | 0.188 | 0.254 | 0.262 | 0.288 | 0.293 | 0.257 | |
40 | 0.058 | 0.412 | 0.252 | 0.089 | 0.103 | 0.421 | 0.409 | 0.250 | 0.058 | 0.100 | 0.128 | 0.180 | 0.192 | 0.236 | 0.263 | 0.211 | |
2 | 5 | 0.226 | 0.110 | 0.165 | 0.209 | 0.213 | 0.110 | 0.108 | 0.160 | 0.221 | 0.214 | 0.206 | 0.188 | 0.188 | 0.181 | 0.166 | 0.211 |
10 | 0.087 | 0.142 | 0.120 | 0.098 | 0.117 | 0.143 | 0.142 | 0.115 | 0.088 | 0.117 | 0.116 | 0.129 | 0.129 | 0.128 | 0.122 | 0.118 | |
20 | 0.064 | 0.132 | 0.085 | 0.074 | 0.083 | 0.135 | 0.131 | 0.091 | 0.064 | 0.086 | 0.089 | 0.099 | 0.097 | 0.098 | 0.095 | 0.089 | |
30 | 0.058 | 0.130 | 0.098 | 0.063 | 0.069 | 0.131 | 0.129 | 0.097 | 0.060 | 0.071 | 0.076 | 0.086 | 0.092 | 0.098 | 0.102 | 0.087 | |
40 | 0.050 | 0.091 | 0.067 | 0.057 | 0.056 | 0.098 | 0.091 | 0.066 | 0.049 | 0.055 | 0.057 | 0.064 | 0.066 | 0.070 | 0.071 | 0.063 |