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. 2013 Dec 20;7(Suppl 7):S4. doi: 10.1186/1753-6561-7-S7-S4

Table 4.

Select Designed Primers

regionID 5'→3' sequence deg sDimer TmRange CG%Range nHits posEcoli
FV3 ACWCCTRCGGGWGGCWG 16 4 51.88→54.29 0.65→0.70 8867 345

FV3 ACWCCTRCGGGWGGCWGCAG 16 6 57.93→59.98 0.65→0.70 8854 345

FV4 AGCAGCCGCGGTAANACG 4 6 52.60→54.88 0.61→0.67 8305 528

FV6 WACSCGMRGAACCTTACC 16 6 48.04→52.60 0.50→0.61 8045 975

FV7 ATGGYYGTCGTCARCTCG 8 4 48.04→54.88 0.50→0.67 8821 1062

FV7 AGTCCNRYAACGAGCGCAACC 16 4 54.36→60.21 0.52→0.67 8788 1103

FV8 AGGAAGGHGDGGAYGASGTC 36 6 53.83→59.98 0.55→0.70 8810 1185


RV3 TTACCGCGGCTGCTGGCAC 1 6 57.56→57.56 0.68→0.68 8926 505

RV3 TWTYACCGCGGCTGCTGG 4 6 52.60→54.88 0.61→0.67 8543 508

RV4 ACCAGGGTATCTAAKCCTG 2 4 48.93→51.09 0.47→0.53 8292 773

RV6 TYACRRCACGAGCTGWCG 16 5 48.04→54.88 0.50→0.67 9026 1052

RV7 ACGTCRTCCHCWCCTTCC 12 4 50.32→54.88 0.56→0.67 8114 1166

RV8 TGWGTACAAGRYCCGRGAACG 16 6 52.40→58.26 0.48→0.62 8411 1367