TABLE 2.
DNA extract (dilution) | Mean Ct value from PCRb of:
|
||
---|---|---|---|
COX | fliG | rol | |
Root (undiluted) | 24.64 | 21.32 | 18.50 |
NCPPB 4042 (undiluted) | —c | 16.06 | 17.19 |
NCPPB 4042 (10−1) | — | 19.30 | 20.72 |
NCPPB 4042 (10−2) | — | 22.89 | 24.20 |
NCPPB 4042 (10−3) | — | 25.97 | 27.52 |
Ct values are from three separate TaqMan assays performed on a root DNA extract obtained from a cucumber cotyledon inoculated with NCPPB 4042 and a dilution series obtained from a pure culture of NCPPB 4042.
For information on procedures for COX PCR, see Weller et al. (34); for fliG PCR, see Weller et al. (36); for rol PCR, see Weller and Stead (35).
—, no fluorescence above threshold was detected.