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. 2014 Jun 4;9(6):e99081. doi: 10.1371/journal.pone.0099081

Table 2. Sequence information and summary statistics for Callinectes sapidus.

Locus Length % S NS Syn H H d π θW θπ KJC θπ/KJC
ant 414 40 33a 2 32 54 0.757 0.003 4.509 0.011 0.019 0.567
atps 227 46 27 0 27 39 0.662 0.005 3.689 0.009 0.003 3.215
tps 368 13 22 5 17 19 0.313 0.001 3.006 0.008 0.054 0.152
hsp 489 23 28 12 16 31 0.757 0.003 3.825 0.008 0.019 0.405
rpl 191 36 11 1 10 23 0.819 0.009 1.503 0.008 0.014 0.574

Length, trimmed length of analyzed sequence; %, percent coverage of the complete mRNA reference sequence available on GenBank (ant: EF077712, tps: EU679406, hsp: DQ663760, rpl: FJ774832) and the partial mRNA of atps (HM217802); S, total number of segregating sites; NS, number of nonsynonymous segregating sites; Syn, number of synonymous segregating sites; H; number of haplotypes; Hd, haplotype diversity; π, nucleotide diversity; θW, Watterson's theta; θπ, theta pi, KJC, mean divergence between C. sapidus and C. similis, defined as the mean number of nucleotide differences per site between species.

a

Indicates one haplotype has a Syn and NS allele, therefore the value of S is 1 less than the sum of NS and Syn.