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. 2014 May 29;14:294. doi: 10.1186/1471-2334-14-294

Table 1.

Primers used

Gene Forward primer (5′ to 3′) Reverse primer (5′ to 3′) Annealing temp. °C Product size (bp)
speA1-3,6 [15]
5′-GGACTAACAATCTCGCAAGAGG-3′
5′-TTACTTGGTTGTTAGGTAGACTTC-3′
54
696
speA4,5 [15]
5′-GCTAACAACCTCACAAGAAG -3′
5′-TGCTTGAGTCAAGCGTCTC-3′
53
659
speC[15]
5′-GATTTCTACTATTTCACC-3′
5′-AAATATCTGATCTAGTCCC-3′
44
584
speG[15]
5′-CTTATGCAGATGAAAATTTAAAAGATT-3′
5′-AAAGCAAAGGGGGGAGAATAG-3′
53.2
664
speI[15]
5′-ATGAGTAGTGTGGGAGTTATTAA-3′
5′-ATGAAGTTGATCAGAATAAGCG-3′
55
645
speJ[15]
5′-ATCTTATTTAGTCCAAAGGTAAAT-3′
5′-GTGAACGAGGAGAGGTATGAA-3′
55.5
718
smeZ[15]
5′-TTGGATTAGAAGTAGATAA-3′
5′-TTGAATTAGGAGTCAATTTCTATATCT-3′
52
638
ssa[15]
5′-AGTCAGCCTGACCCTACTCCA-3′
5′-TAAGGTGAACCTCTATAGCTATAG-3′
59.1
691
speH[6]
5′-TTGGATCCAATTCTTATAATACAACC-3′
5′-CCACTTCCTGAGCGGTTACTTTCGG-3′
50
399
speJ[6]
5′-CTATGGTGGAATTACACC-3′
5′-CATGTTTATTGCCATTGATCGC-3′
50
247
speK[6]
5′-GCGGATCCGATACGTACAATACAAATG-3′
5′-GCGAATTCAATAGCATTCAACCA-3′
50
798
speL[6]
5′-GCAGCCATATGGAAGAGACTATTCCTCTTAAGGATATATACTCTC-3′
5′-GGGGATCCTTAATTTTCTTTGTTTGTGAATAAATAGAC-3′
50
703
speM[6]
5′-GCAGCCATATGTTTTCAGATGCTGTGTTGG-3′
5′-GGGGATCCTTAATTTTTAGAAAAATCTTCGTTTAAGTA-3′
50
661
speB[6] 5′-GGATCCCAACCAGTTGTTAAATCTCT-3′ 5′-AACGTTCTAAGGTTTGATGCCTACAA-3′ 50 774

All primer sequences shown here have previously been published by Maripuu et al. or Commons et al.