Table 1.

Total number of reads sequenced and mapped onto the Heinz 1706 reference genome after resequencing eight tomato accessions using Illumina Genome Analyser

Accession	Cervil	Plovdiv	LA1420	Criollo	Stupicke	Ferum	Levovil	LA0147
Nb reads (million)	149.2	124.7	121.9	84.3	123.7	88.4	69.2	208.4
Nb nucleotides (Gigabases)	15.1	12.6	12.3	8.5	12.5	8.9	7.0	20.2
Depth	19.6	16.5	16.2	11.1	16.4	11.7	9.2	26.5
% sequences after cleaning	85.3	87.3	90.1	89.6	88.3	87.5	88.2	81.8
Depth after cleaning	13.3	12.2	12.5	8.1	12.0	8.2	6.7	16.6
% sequences mapped	95.4	97.1	97.1	98.2	98.2	98.5	95.9	98.8
% coverage (depth = 4)	88.8	88.6	88.9	81.1	90.5	82.2	72.7	92.3