Table 7.
Significant chromosomal Regions with TAS affecting gene expression in Longissimus dorsi
| Annotation | |||||||
|---|---|---|---|---|---|---|---|
| Chromosome | Region (Mb) | N° of SNPs | a (SE) | P-value | Probe | Gene | Chromosome (Position, Mb) |
| 1 | 81.21-85.72 | 9 | 0.72 (0.18) | 6.7 × 10-5 | Ssc.21663.1.A1_at | LIPG | 1 (108.64) |
| 1 | 84.36-85.72 | 2 | −0.48 (0.11) | 9.8 × 10-6 | Ssc.21926.1.S1_at | LDLR | 2 (70.19) |
| 4 | 92.44-92.69 | 2 | 0.48 (0.13) | 5.7 × 10-4 | Ssc.22641.3.S1_at | RDH16 | 5 (24.13) |
| 4 | 92.04-92.44 | 5 | −0.57 (0.14) | 1.2 × 10-4 | Ssc.11186.1.S1_at | NUDT7 | 6 (10.10) |
| 8 | 114.73-123.96 | 26 | −0.67 (0.14) | 1.3 × 10-6 | Ssc.1008.1.A1_at | ELOVL6 | 8 (120.12) |
| 8 | 117.90-126.37 | 28 | 0.38 (0.07) | 1.6 × 10-6 | Ssc.21635.1.A1_at | MGST2 | 8 (92.87) |
| 8 | 117.90-126.37 | 29 | −0.43 (0.08) | 1.1 × 10-7 | Ssc.16096.2.S1_a_at | KIT | 8 (43.55) |
| 8 | 120.94-128.08 | 15 | −0.64 (0.12) | 8.8 × 10-7 | Ssc.25357.1.S1_at | IL1R2 | 15 (54.94) |
a (SE): additive effect (standard error).