Table 2.
Genomes used in this study
| Strain | Host | Disease | Genome size (Mb) | Genbank recordb | Reference |
|---|---|---|---|---|---|
| X. albilineans GPE PC73 | Sugarcane | Leaf Scald | 3.76 | [Genbank:NC_013722] | [25] |
| X. arboricola LMG 19145 | Strawberry | Leaf Blighta | 4.86 | unreleased | Unpublished |
| X. arboricola LMG 19146 | Strawberry | Leaf Blighta | 5.09 | unreleased | Unpublished |
| X. arboricola pv. pruni LMG 25862 | Apricot, Plum & peach | Bacterial Spot | 5.02 | unreleased | Unpublished |
| X. axonopodis (citri) pv. citri 306 | Citrus | Bacterial Canker A | 5.17 | [Genbank:NC_003919] | [26] |
| X. axonopodis pv. citrumelonis F1 (FL 1195) | Citrumelo | Bacterial Spot | 4.97 | [Genbank:NC_016010] | [27] |
| X. axonopodis pv. punicae LMG 859 | Pomegranate | Bacterial Blight | 4.94 | [Genbank:NZ_CAGJ01000000] | [28] |
| X. campestris (vasicola) pv. musacearum NCPPB 4381 | Banana | Bacterial Wilt | 5.42 | [Genbank:NZ_ACHS01000000] | [29] |
| X. campestris (vasicola) pv. vasculorum NCPPB 702 | Sugarcane | Gumming Disease | 4.78 | [Genbank:NZ_ACHT00000000] | [29] |
| X. campestris pv. campestris ATCC 33913 | Crucifers | Black Rot | 5.08 | [Genbank:NC_003902] | [26] |
| X. campestris pv. campestris 8004 | Crucifers | Black Rot | 5.15 | [Genbank:NC_007086] | [30] |
| X. campestris pv. campestris B100 | Crucifers | Black Rot | 5.08 | [Genbank:NC_010688] | [31] |
| X. campestris pv. raphani 756C | Crucifers | Leaf Spot | 4.94 | [Genbank:NC_017271] | [32] |
| X. campestris pv. vesicatoria (X. euvesicatoria) 85-10 | Pepper & tomato | Bacterial Spot A | 5.18 | [Genbank:NC_007508] | [33] |
| X. citri pv. mangiferaeindicae LMG 941 | Mango | Bacterial Canker | 5.11 | [Genbank:NZ_CAHO00000000] | [34] |
| X. fragariae LMG 25863 | Strawberry | Angular Leaf Spot | 4.18 | [Genbank:AJRZ00000000] | This study |
| X. fuscans pv. aurantifolii ICPB 11122 | Citrus | Bacterial Canker B | 4.88 | [Genbank:NZ_ACPX00000000] | [35] |
| X. fuscans pv. aurantifolii ICPB 10535 | Citrus | Bacterial Canker C | 5.01 | [Genbank:NZ_ACPY00000000] | [35] |
| X. gardneri ATCC 19865 | Pepper & tomato | Bacterial Spot D | 5.53 | [Genbank:NZ_AEQX00000000] | [24] |
| X. oryzae pv. oryzae KACC 10331 | Rice | Bacterial Blight | 4.94 | [Genbank:NC_006834] | [36] |
| X. oryzae pv. oryzae MAFF 311018 | Rice | Bacterial Blight | 4.94 | [Genbank:NC_007705] | [37] |
| X. oryzae pv. oryzae PXO 99A | Rice | Bacterial Blight | 5.24 | [Genbank:NC_010717] | [38] |
| X. oryzae pv. oryzicola BLS256 | Rice | Leaf Streak | 4.83 | [Genbank:NC_017267] | [32] |
| X. perforans 91-118 | Tomato | Bacterial Spot C | 5.26 | [Genbank:NZ_AEQW00000000] | [24] |
| X. sacchari NCPPB 4393 | Sugarcane, insects | 4.9 | [Genbank:NZ_AGDB00000000] | [29] | |
| X. vesicatoria ATCC 35937 | Pepper & tomato | Bacterial Spot B | 5.53 | [Genbank:NZ_AEQV00000000] | [24] |
Alphabetic overview of the 26 Xanthomonas strains whose genomes were compared in this study, together with their associated natural hosts and diseases, genome size, Genbank records and relevant literature references, when available. Where the current consensus classification of the organism deviates from the given name in Genbank, the current consensus classification is given between brackets. aDisputed in Vandroemme et al. [39]. bOnly the Genbank records of the chromosomes are given.