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. 2013 Dec 5;14(1):856. doi: 10.1186/1471-2164-14-856

Table 2.

Detection of single nucleotide variants and error rates in genomic DNA and whole genome amplified DNA

Sample Somatic SNVsa Errorb
ALL1_gDNA 227 (13) 0.036
ALL1_wgaDNA 223 (9) 0.020
ALL2_gDNA 305 (5) 0.038
ALL2_wgaDNA 302 (2) 0.031

a Within parenthesis is the number of candidate SNVs that were not classified as somatic in the corresponding gDNA or wgaDNA experiment from the same original sample.

b Average absolute difference from 0.5 for 19 germline SNPs.