Table 2.
Detection of single nucleotide variants and error rates in genomic DNA and whole genome amplified DNA
| Sample | Somatic SNVsa | Errorb |
|---|---|---|
| ALL1_gDNA | 227 (13) | 0.036 |
| ALL1_wgaDNA | 223 (9) | 0.020 |
| ALL2_gDNA | 305 (5) | 0.038 |
| ALL2_wgaDNA | 302 (2) | 0.031 |
a Within parenthesis is the number of candidate SNVs that were not classified as somatic in the corresponding gDNA or wgaDNA experiment from the same original sample.
b Average absolute difference from 0.5 for 19 germline SNPs.